Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2487g00003 ATGACTTCCTATCAATTATCGACAAAAATCCTCGCCATATGCTTGATATCTCTTCCTCTTTTCGTCGCATTCAGACTCTCCCTTCCCTTCTCATCATTCTCGAATCAAACCCTGAGTTTGGCCGACGCAAGAGTTCTGGACAAAGTGTCTCGGAATGATTCCTCCCTGGCTCAAGGCTCAGAAGACGGTTACTCTCAGTCCTCTAGCGTGTCAGAAGATAAATTTCTTGGGGGACTTCTTCCTCCTGGGTTTAATGAAGGCTCTTGCGTAAGCAGGTACCAATCCTGGCTATATCACAAGAAACCTTCACCCCATAAACCTTCTCCTTATCTTCTCTCCAGGCTTCGCGCTTATGAAGATCTCCATAAACGCTGTGGACCCTACACCAAATCCTATAACAAGACCATAAAACAGCTTAGGTCTAGAAACATTGTCAGCTCTGCAGAATCTTCAGAGTGTAAATATGTTGTCTGGGTATCTTTTAGTGGCTTGGGGAACAGAATCTTAACAGTAGCATCGGCTTTTCTATATGCCATCCTTACAAACAGAGTTCTGCTCATTGACCCAGGAAAAGACATGCCTGATCTTTTTTGTGAGCCATTTCCAGAAACCTCGTGGTTGCTACCCACTAATTTTCCTCTTAAACGCAGGTTTGATAAGTTTAATCAGAAGACTCCGAATTCTTATGGAAACATGCTCAAGAGAAACAAACTAAACGCTTCATCTGAATTGTTTCCCTCATATTTATATCTTCATCTGGTTCATGATTATGATGACCATGATAGACTTATATTCTGTGATCAACACCAAACACCCATGAACAGAGTTCCTTGGTTAATTATGAAATCTGACAACTACTTTGTTCCATCACTCTTCTTGTCCCCTTCTTTTGATCAAGAACTAAGTAGATTATTCCCCGACAAAGCAACTGTTTTCCACCACCTGAGTAGGTATCTTTTTCACCCCAGTAACCAAGTTTGGGGCCTAATCACTAGATATTATTGGACCTACTTAGCAAAAGCAGATGAGACAATCGGTATACAGATTCGAGTCTTTGAATCTTCCTCAGGGCCATATCAGCATGTAATGGACCAAATCCTGGCCTGTACATTGAAGCAGAATCTGCTGCCTGAAGTTGATCAGCAAGAATCTTCTGCCGATCCATCAGTAAAACCAAAATCAAAAGCTATTTTGATGACATCTTTAAGTTCTGGGTACTTTGAGAATCTGAGAAACATGTATTGGGAACACCCCACAGTGACTGGAGATTTGATTGGGATTTATCAGCCAAGCCATGAAGAATATCAGCAGACAGAGAAGCAATCACACGATAGAAAGGCATGGGCTGAAATGTACCTTCTGAGTCTAACAGATGTTTTAATCACAAGTGCATGGTCAACGTTTGGGTATGTGGCCCAGGGCCTTGGAGGGTTGAAGCCATTGATTCTCTTCAAACCAGAGAATCGCACTGTACCAGATCCACCCTGTGGTCGTGTCATTTCAATGGAGCCATGTTTTCATGCCCCACCAAATTATGATTGCAAGGCAAAGACGGGGGCTGATCCTGGCAATCTTGTTCCTCATGTGAGGCATTGTGAAGATATGAGCTGGGGCCTCAAGTTAGTTGACAGACATGATGATATTTAA 1647 0.4256 MTSYQLSTKILAICLISLPLFVAFRLSLPFSSFSNQTLSLADARVLDKVSRNDSSLAQGSEDGYSQSSSVSEDKFLGGLLPPGFNEGSCVSRYQSWLYHKKPSPHKPSPYLLSRLRAYEDLHKRCGPYTKSYNKTIKQLRSRNIVSSAESSECKYVVWVSFSGLGNRILTVASAFLYAILTNRVLLIDPGKDMPDLFCEPFPETSWLLPTNFPLKRRFDKFNQKTPNSYGNMLKRNKLNASSELFPSYLYLHLVHDYDDHDRLIFCDQHQTPMNRVPWLIMKSDNYFVPSLFLSPSFDQELSRLFPDKATVFHHLSRYLFHPSNQVWGLITRYYWTYLAKADETIGIQIRVFESSSGPYQHVMDQILACTLKQNLLPEVDQQESSADPSVKPKSKAILMTSLSSGYFENLRNMYWEHPTVTGDLIGIYQPSHEEYQQTEKQSHDRKAWAEMYLLSLTDVLITSAWSTFGYVAQGLGGLKPLILFKPENRTVPDPPCGRVISMEPCFHAPPNYDCKAKTGADPGNLVPHVRHCEDMSWGLKLVDRHDDI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2487g00003 548 PANTHER FUCOSYLTRANSFERASE 2-RELATED 10 543 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pral2487g00003 548 Gene3D - 150 201 - -
Pral2487g00003 548 Pfam Xyloglucan fucosyltransferase 62 515 IPR004938 GO:0008107|GO:0016020|GO:0042546
Pral2487g00003 548 FunFam Galactoside 2-alpha-L-fucosyltransferase 151 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2487g00003 Pral-Chr2487 39089 41404 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2487g00003 8 542 Xyloglucan Fucosyltransferase1 AT2G03220 61.194 0.0 684
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2487g00003 K13681 - cave:132177716 777.704