Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1976g00001 ATGGAGAGAGGGTGGAAGCATAATTCGGAGATATCACCGAACTGTCCCAGGTGTGGGTCTTGCAACACCAAGTTCTGCTATTACAATAACTACAGCTTAACTCAACCTCGCTACTTTTGTAAAGGCTGCAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAACGTCCCCGTTGGTGGCGGCTGCCGGAAAACCAGGCGCCACACTAGCAAGACTTTAAGAGTGAACTCATCAGCCTTGCCTTCACCAAATGCTGCTGCTGTTTCATCTTCTAGCTCCTCATCACCGGCCTCTGATCATGCTCCACATATTGATATTGCACTCATTTATGCCAATTTTCTCAATCAAAACCCAGATTCAAGTGACCAGGAGCCGCATCATCAGTTTATGAAGACACTAGGTTTTGATCCTTGCGTAGAGTATTCGAGTCTGTCCGACATAGTTTTTGGTCTTTCTGAACCATCCACAATAGAATCCCATTTCAACATTGCTGCGGGTCATCATCTAGGTGGGTTATTCAACTCCATGCAGGAGCATAAGGGAGAGAGAATAATTGGCAGTAGCGATTTTGAGCTGCCACCATTGCCGGGTGAAGAGGTCGCCTCGCAGTATGATATGATGATGTGGTCCGAATCTCATGATGAGATGATGGTCGTAAACCAGGCGCCACTTGGAACTCATCAACCTCATGTAGATGGTAACTGGGGACCTTTTCATTACTCAACCAATGTTCTTTTCCCGGCCTTTGATTATACATTTGTATCTCTTCATTCTTGCCTTGTTTCAAGTCATTAA 795 0.4604 MERGWKHNSEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKTRRHTSKTLRVNSSALPSPNAAAVSSSSSSSPASDHAPHIDIALIYANFLNQNPDSSDQEPHHQFMKTLGFDPCVEYSSLSDIVFGLSEPSTIESHFNIAAGHHLGGLFNSMQEHKGERIIGSSDFELPPLPGEEVASQYDMMMWSESHDEMMVVNQAPLGTHQPHVDGNWGPFHYSTNVLFPAFDYTFVSLHSCLVSSH 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1976g00001 264 MobiDBLite consensus disorder prediction 77 100 - -
Pral1976g00001 264 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 10 150 IPR045174 GO:0003700|GO:0006355
Pral1976g00001 264 ProSiteProfiles Zinc finger Dof-type profile. 13 67 IPR003851 GO:0003677|GO:0006355
Pral1976g00001 264 ProSitePatterns Zinc finger Dof-type signature. 15 51 IPR003851 GO:0003677|GO:0006355
Pral1976g00001 264 MobiDBLite consensus disorder prediction 77 99 - -
Pral1976g00001 264 Pfam Dof domain, zinc finger 14 67 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1976g00001 Pral-Chr1976 1030 1824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1976g00001 8 243 C2C2-Dof Transcription Factor Family AT3G52440 41.569 2.60e-49 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral1976g00001 zf-Dof 3.5e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1976g00001 - - pcin:129303526 309.686