Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1070g00011 ATGGGCCTTGCCCGGTTATTACTGGTAATCATATTCGGTATTGCCGCCGCATCATGGGCGGTGGTGGAGGCTCAGCGAGAGGCGAGGTTCAAATGCAGCTCGCAAGGTAAAACGTGTCGTTCTCTGGTGGATTATTCGTCCCCAAATGAAACCACCTTAGGCCACATTCAAAAGCTCTTCAACTTGAAGCACGTTCTGGACATAGTGGGCGCTAACGCCCTCCCCTCCTCCACCCGAGGCAACCGCACCGTTAAAAAGGGCGAAATTATCAAAATCCCCTTTCAGTGCATGTGCTCCAACGGCACCGGCTTGTCCAACAAGACGCCTCTCTACACCATCCAGAAAGACGACACGCTTTCCCACATAGCCATGGAAGTGTTCTCGCGTTTGGTCACTTACCAACAACTCCAAACGCTCAACAACATACCGGACCCTACAAAGATTCAGCCCGGCCAGAAGGTGTGGATCCCTCTCCCTTGCAGCTGCGATCAGGTGGACGGCACTGGTGCCGTCCATTATGGATATCTGGTGGCTACGGGAAGCTCCTTTCAGCAGATTGCTCAACAATACGGCACCACCCTGGACACCCTTCTCGACCTCAACGGCATTTCTGATCCCAAGTCCCTTCAAGCCGGTCAAATCATCGATGTTCCCCTCAAAGCATGCTCCTCATCGGTGAAAAATGACTCCTTGGACTATCCTCTGCTCGTTGCAAATGGTACCGACACCTACACAGCCAATGGTTGCGTCAAGTGCAGCTGTAACTCCGCCGCCAATAACGCCACATTACAATGCGAGCCATCGCAAGTCAAACCATATAGATGGGGTAAATGCCCAGCCATGGTTTGCGGTAGTTCAACCATTGGCAACATCACTTCTACAAATACCTGCACTCGCACCATCTGTGCTTACGATGGTTATAACAACCGAACTATAGCCACCGCTCTTGTCAACGAGTCCACTTGTCCTGCTTCAACAGAATCGGGAGCATCCAGGATCAGCTTCCAGGGCTGGGGTTGGAATCATCTTTTCACGGCCCTTCACTTTATCTGCTTTTGTGTCTGTCTTTTGCAGTGA 1077 0.5162 MGLARLLLVIIFGIAAASWAVVEAQREARFKCSSQGKTCRSLVDYSSPNETTLGHIQKLFNLKHVLDIVGANALPSSTRGNRTVKKGEIIKIPFQCMCSNGTGLSNKTPLYTIQKDDTLSHIAMEVFSRLVTYQQLQTLNNIPDPTKIQPGQKVWIPLPCSCDQVDGTGAVHYGYLVATGSSFQQIAQQYGTTLDTLLDLNGISDPKSLQAGQIIDVPLKACSSSVKNDSLDYPLLVANGTDTYTANGCVKCSCNSAANNATLQCEPSQVKPYRWGKCPAMVCGSSTIGNITSTNTCTRTICAYDGYNNRTIATALVNESTCPASTESGASRISFQGWGWNHLFTALHFICFCVCLLQ 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1070g00011 358 CDD LysM 111 156 IPR018392 -
Pral1070g00011 358 SUPERFAMILY LysM domain 174 218 IPR036779 -
Pral1070g00011 358 ProSiteProfiles LysM domain profile. 173 217 IPR018392 -
Pral1070g00011 358 Gene3D LysM domain 105 164 IPR036779 -
Pral1070g00011 358 Pfam LysM domain 111 157 IPR018392 -
Pral1070g00011 358 Pfam LysM domain 175 218 IPR018392 -
Pral1070g00011 358 SMART LysM_2 110 157 IPR018392 -
Pral1070g00011 358 SMART LysM_2 174 218 IPR018392 -
Pral1070g00011 358 ProSiteProfiles LysM domain profile. 109 156 IPR018392 -
Pral1070g00011 358 SUPERFAMILY LysM domain 110 158 IPR036779 -
Pral1070g00011 358 CDD LysM 175 217 IPR018392 -
Pral1070g00011 358 Gene3D LysM domain 165 231 IPR036779 -
Pral1070g00011 358 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 6 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1070g00011 Pral-Chr1070 36728 38414 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1070g00011 14 325 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 46.645 3.76e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1070g00011 - - lang:109351135 369.392