Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02234 ATGGAAGACAATGGCAGTTCCCATGAACCCAACAACAACTTCAAGTGGCCTCTCTTCATTTTCTTCAAAGGTGCAAGGCATATTTTCAAACTGGATGCACTTTCTCGGGAGTTATTAGGGATTGCATTCCCTTCAGCACTAGCCGTTGCAGCTGATCCAATTGCTTCTCTAATTGACACAGCCTTCATAGGCCACTTAGGGCCAGTGGAACTTGCTGCTGCTGGAGTTTCCATTGCTTTGTTCAACCAAGCTTCAAGAATCACCATTTTCCCTCTGGTCAGCATTACCACTTCATTTGTGGCTGAGGAAGATACTCTTGAAAAGCTGAATAACAAATTCAAGTTCAAAGAAGTGATTGTGCCAGAGGATCATATGCTTCAAGACATACAAAAAGATACCCTCAAAGAAAAACCTATGGTTGAAAAATGTGAATCAAAGGATCTCCAAGCTCTGCAAAATTATAATGCTACAAGGGACAATGACCCAGAAATTGGAGATGAAGGCAATAAAAATATATGCAAGTCTTCTAAGAGTAGGGAGAAAGTTGAAAAGAAGAAGAGACGCATTGCTTCAGCATCAACAGCTCTACTTTTTGGCACCATTCTTGGCCTCATTCAAACTTCTGTTCTTATTTTTGCAGCAAAACCTCTCTTACGTGTTATGGGTGTCAAACCAGATTCTCCGATGCTAAATCCAGCAGAAAAGTACTTAAAATTGAGATCCGTTGGGGCACCTGCAGTGCTTCTCTCCTTGGCCATGCAAGGAATCTTTAGAGGGTTTAAGGATACAAAAACTCCATTATATGTCATTGTTTCAGGATACACATTTAATGTCATCTTGGATCCAATTCTTATTTTCACATTGAAACTAGGCCTCAAAGGTGCAGCCATTTCACATGTTCTTTCCCAGTACATGATGGCAATCACTCTCTTACTGATACTAATGAAAAAAGTGCATCTCCTACCTCCAAGCATAAAGGATTTGCAGATCTTCAGATTTCTTAAAAATGGAGGTTTGTTGATGGTAAGGGTAATAGCAGTGACATTTTGTGTGACCTTGGCAGCATCATTGGCAGCAAGGTTAGGTTCAGTTCCCATGGCTGCCTTTCAAACATGCCTACAAGTCTGGTTAACATCATCTCTTCTTGCAGATGGTTTAGCTGTTGCTGTTCAGGCAATTCTAGCTTGTTCTTTTGCAGAAAAAGACCATAAGAAAGCAACAGCAGCTGCAACAAAAACACTGCAAATGAGTTTTGTTTTAGGAATGGGACTCTCTCTTGCTGTTGGACTTGGATTATACTTTGGAGCTGGAGTATTCTCCAAAAATGTTCATGTTGTGCACTTCATTAAAATAAGCATCCCGTTTGTGGCTGCTACTCAACCAATTAATTCATTAGCCTTTGTATTTGATGGAGTGAACTATGGAGCTTCTGATTTTGCATATTCAGCATACTCTCTGGTGGTGGTGTCCCTAGTAAGTGTAGCCATAGAGTTTGTTCTCTACAGGGCAAAACATTTCATTGGGATTTGGATTGCACTAACCATATATATGACTCTTCGCATGTTGGCTGGTGTGTGGAGGATGGGAACTGGGACAGGACCTTGGCACTATCTCAGAGGTTGCTCATTATCTTAG 1635 0.4098 MEDNGSSHEPNNNFKWPLFIFFKGARHIFKLDALSRELLGIAFPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEEDTLEKLNNKFKFKEVIVPEDHMLQDIQKDTLKEKPMVEKCESKDLQALQNYNATRDNDPEIGDEGNKNICKSSKSREKVEKKKRRIASASTALLFGTILGLIQTSVLIFAAKPLLRVMGVKPDSPMLNPAEKYLKLRSVGAPAVLLSLAMQGIFRGFKDTKTPLYVIVSGYTFNVILDPILIFTLKLGLKGAAISHVLSQYMMAITLLLILMKKVHLLPPSIKDLQIFRFLKNGGLLMVRVIAVTFCVTLAASLAARLGSVPMAAFQTCLQVWLTSSLLADGLAVAVQAILACSFAEKDHKKATAAATKTLQMSFVLGMGLSLAVGLGLYFGAGVFSKNVHVVHFIKISIPFVAATQPINSLAFVFDGVNYGASDFAYSAYSLVVVSLVSVAIEFVLYRAKHFIGIWIALTIYMTLRMLAGVWRMGTGTGPWHYLRGCSLS 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02234 544 CDD MATE_DinF_like 36 530 IPR044644 -
Phco9g02234 544 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 6 539 IPR044644 -
Phco9g02234 544 Pfam MatE 191 283 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco9g02234 544 Pfam MatE 341 498 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Phco9g02234 544 NCBIfam MATE family efflux transporter 44 510 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02234 Phco-Chr9 47678673 47683853 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02234 9 47678673 47683853 Phco9g02234 9 47678673 47683853 ECH