Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02229 ATGGAGTCTGAAGGCGAAGCTGGGGCAAAGCCAGTGACAGCATTGAGTGCCCAAGTGTGCCAGATATGTGGTGATGGTGTTGGGAAGAATGTGGATGGTGAACCTTTCATTGCGTGCGATGTTTGTGCTTTCCCTGTATGCAGACCTTGTTATGAGTATGAAAGGAAGGATGGGAATCAGTCTTGCCCCCAGTGCAAAACCCGGTACAAGAGGCACAAAGGAAGTCCTGCAATTCTTGGAGACACGGAAGAGGATGCTGCTGCTACTGATATTGCCAGCGACTTTAATTACGATTCAGACAATCAAAACCAAAAGCAGAAGATTTCAGAGCGCATGTTAAGCTGGCAATTGACTTATGCACGAGGTGAGGAGGTTGGTGCTCCAAATTATGATAAGGAAGTTTCTCACAACCACATTCCTCTGCTGACCAGTGGACAAGAGGTATCTGGAGAGTTGTCTGCAGCCTCACCTGAGAGGCTCTCAATGGCATCTCCTGCAGTTGGTGGAGGAAAACGTGTCCATAATATTCCATATTCATCTGATATCAGTCAATCTCCTAATATCAGGGCTGGGGATCCAGGTTTGGGTAATGTTGCATGGAAAGAAAGAGTTGATGGCTGGAAGATGAAGCAAGAAAAGAATGTTGTTCCAATGAGCACCGGCCAAGCTGCTTCTGAGAGAGGAGCTGGAGATATTGATGCTGCTACAGACGTGCTTGTGGATGATTCCTTGTTGAATGATGAAGCTCGACAGCCTCTTTCTAGGAAGGTTTCAATTTCATCATCCAGGATAAATCCATATCGTATGGTCATTATGTTGCGGCTGGTTATCCTTTGCATTTTCTTGCATTATCGGATAACAAATCCCGTGCCCAATGCATATCCATTGTGGTTGGTATCAGTTATATGTGAGATTTGGTTTGCCATATCTTGGATATTGGATCAATTCCCCAAGTGGCTTCCTGTCAACCGGGAAACATATCTTGACAGGCTTGCATTGAGGTATGATCGGGAAGGAGAACCGTCACAGCTAGCTGCTGTTGACATTTTTGTGAGTACTGTTGACCCATTAAAGGAGCCCCCTCTTGTGACTGCCAATACTGTATTGTCTATTCTGGCAGTTGACTACCCAGTGGATAAGGTCTCCTGCTATGTGTCTGATGATGGTGCTGCTATGTTGACATTCGAAGCCCTTGCCGAGACATCAGAATTTGCAAGGAAATGGGTTCCCTTTTCCAAGAAGTATAGCATTGAACCCCGTGCACCTGAGTGGTACTTTGCACAAAAGATTGACTACTTGAAAGATAAGGTTCATCCATCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATATGAGGAATTTAAAGTTCGAATTAATGGACTTGTTGCAAAGGCACAGAAAATTCCTGAAGAAGGATGGGTGATGCAAGATGGTACACCATGGCCTGGAAATAACACCAGAGACCATCCAGGAATGATCCAGGTTTTCTTGGGCCAAAGTGGAGGACTTGACACTGAGGGTAATGAACTTCCCCGTCTAGTCTATGTGTCTCGTGAAAAGCGCCCAGGTTTCCAACATCACAAGAAAGCTGGTGCCATGAATGCACTTGTAAGAGTATCTGCTGTCCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCCTTGAGGGAAGCTATGTGCTTTATGATGGATCCCAACCTTGGTAAACATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGAAATGATCGTTATGCCAATCGAAATACGGTGTTCTTTGATATAAACTTGAGAGGCTTGGATGGCATTCAGGGTCCTGTTTATGTTGGTACTGGATGTGTCTTCAATAGGACAGCTTTATATGGTTATGAACCTCCTCTTAAACCCAAGCATAAAAAGCCTGGGTTTTTATCGTCACTCTGTGGTGGAAATCGGAAGAGTTCAAAATCTAGTAAGAAAGGATCAGACAAGAAAAAATCTAGCAAGCATGTTGACCCAACTGTACCTATCTTCAGTCTAGAGGATATAGAAGAAGGAGTAGAAGGTACTGGATTTGATGATGAGAAATCATTACTTATGTCACAAATGAGCCTTGAGAAAAGGTTTGGTCAGTCTGCAGTTTTTGTAGCCTCTACCCTTATGGAGAATGGTGGTGTTCCTCAGTCTGCTACTCCAGAAACTCTTCTTAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGATAAATCAGAATGGGGATCCGAGATAGGATGGATTTATGGTTCCGTCACAGAAGATATTCTTACTGGATTTAAGATGCATGCCCGCGGTTGGCGGTCTATATACTGCATGCCGAAGCGGCCAGCGTTTAAAGGTTCTGCTCCCATCAATCTTTCAGACCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCTGTGGAAATTCTTTTTAGCAGACATTGTCCCATCTGGTATGGTTATGGTGGAAGGCTAAAGTGGCTTGAAAGGTTCGCTTATGTGAACACCACAATCTATCCACTCACGGCCATTCCCCTTCTCATTTATTGTATCTTGCCTGCTGTCTGTCTGCTGACCAACAAGTTCATTATTCCGCAGATCAGTAACCTTGCAAGCATATGGTTCATCTCTCTCTTTCTCTCCATCTTTGCTACCGGAATCCTGGAGATGAGGTGGAGTGGCGTAGGAATCGACGAGTGGTGGAGGAACGAACAGTTTTGGGTCATCGGCGGTGTCTCGGCCCATCTCTTTGCCGTTTTCCAGGGCCTTCTCAAAGTGCTTGCTGGAATTGACACCAACTTCACTGTCACCTCCAAGGCCTCAGACGAAGATGGAGATTTTGCTGAGCTCTACTTGTTCAAATGGACCACCCTTCTCATCCCCCCCACAACACTTCTCATAATAAACATGGTAGGGGTTGTTGCTGGCATCTCCTATGCCATCAACAGTGGCTACCAATCATGGGGACCCCTCTTTGGCAAGCTTTTCTTTGCATTTTGGGTCATCGTCCATCTCTACCCTTTCCTCAAAGGTCTCATGGGGCGCCAGAACAGAACACCAACCATTGTGGTGGTGTGGTCCATTCTGCTTGCATCCATTTTCTCTCTGTTGTGGGTGAGAATTGATCCTTTCACCACAAGGGTCACTGGCCCTGATGTTGAAGAGTGTGGTATCAACTGCTAG 3225 0.4512 MESEGEAGAKPVTALSAQVCQICGDGVGKNVDGEPFIACDVCAFPVCRPCYEYERKDGNQSCPQCKTRYKRHKGSPAILGDTEEDAAATDIASDFNYDSDNQNQKQKISERMLSWQLTYARGEEVGAPNYDKEVSHNHIPLLTSGQEVSGELSAASPERLSMASPAVGGGKRVHNIPYSSDISQSPNIRAGDPGLGNVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDAATDVLVDDSLLNDEARQPLSRKVSISSSRINPYRMVIMLRLVILCIFLHYRITNPVPNAYPLWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFSKKYSIEPRAPEWYFAQKIDYLKDKVHPSFVKDRRAMKREYEEFKVRINGLVAKAQKIPEEGWVMQDGTPWPGNNTRDHPGMIQVFLGQSGGLDTEGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGYEPPLKPKHKKPGFLSSLCGGNRKSSKSSKKGSDKKKSSKHVDPTVPIFSLEDIEEGVEGTGFDDEKSLLMSQMSLEKRFGQSAVFVASTLMENGGVPQSATPETLLKEAIHVISCGYEDKSEWGSEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYVNTTIYPLTAIPLLIYCILPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYLFKWTTLLIPPTTLLIINMVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRIDPFTTRVTGPDVEECGINC 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02229 1074 MobiDBLite consensus disorder prediction 649 678 - -
Phco9g02229 1074 CDD mRING-HC-C4C4_CesA 18 68 - -
Phco9g02229 1074 SUPERFAMILY RING/U-box 5 90 - -
Phco9g02229 1074 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 94 IPR013083 -
Phco9g02229 1074 FunFam Cellulose synthase 3 94 - -
Phco9g02229 1074 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 250 1041 - -
Phco9g02229 1074 SUPERFAMILY Nucleotide-diphospho-sugar transferases 361 876 IPR029044 -
Phco9g02229 1074 Pfam Zinc-binding RING-finger 10 85 IPR027934 -
Phco9g02229 1074 FunFam Cellulose synthase 464 638 - -
Phco9g02229 1074 Pfam Cellulose synthase 347 1067 IPR005150 GO:0016020|GO:0016760|GO:0030244
Phco9g02229 1074 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 470 638 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02229 Phco-Chr9 47639852 47645764 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02229 9 47639852 47645764 Phco10g00225 10 1935402 1942373 PCT