Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02225 ATGAGGATTTCTCTAAGCTTTGTGGCAGTTTCATCATTCTGGCAAATGGGGGATGATGGAAAGAAGAACGGTGGAGAGGGGGGTTTGGTGAAGGTGGACCCAAAACCCAGCAATGGCTTCACCTCAAAAGTGATTGATTTGTTGGAGAAGCTGGTGGTGAAGTTTTTGTATGACTCTTCACTGCCCCATCACTACCTCACTGGTAATTTTGGTCCTGTTACTGAGACCCCTCCCACCAAGGATCTTCCTGTCAAAGGGCACCTCCCGGATTGCTTGAACGGGGAGTTTGTCAGAGTTGGACCTAATCCAAAGTTTGCTCCTGTTGCTGGATATCACTGGTTTGATGGAGATGGAATGATTCATGGTTTGCGCATCAAAGATGGAAAAGCTACATATGTTTCACGTTTTGTGAAAACTTCTCGTCTTAAACAAGAAGAATACTTTGGACAGTCTAAATTTATGAAGATTGGAGATCTCAAGGGTCTATTTGGACTTTTAATGGTTAACATTCATATGTTGAGAACTAAATTGAAAGTGTTGGATCTTTCTTATGGAGGTGGAACAGCCAATACTGCTCTCGTATATCATCACGGGAAGCTTCTAGCTCTCTCAGAAGCAGATAAACCCTATGCTATTAAAGTTTTTGAAGATGGTGATTTGCAGACACTTGGAATGCTAGATTATGATAAAAGATTGGGTCACTCCTTCACTGCTCATCCAAAAGTTGACCCTTTTACTGGGGAGATGTTTTCATTTGGCTATGCACATACACCACCATATATCACATACAGAGTAATTTCAAAGGATGGTTATATGCATGATCCTGTACCCATAACAATTTCAGATCCCATCATGATGCATGACTTTGCCATCACAGAGAATTATGCAGTATTCATGGATCTTCCTCTGATTTTTAGGCCAAAGGAAATGGTGAAGAATAAGACATTGATATTCTCATTTGATTCAACCAGGAAAGCCCGTTTCGGTGTGCTACCTCGGTATGCTAAGGATGAACAGCATATTAGATGGTTTGAGCTACCAAACTGCTTCATATTCCACAATGCCAATGCTTGGGAGGAGGAAGATGAAGTTGTTCTAATCACATGCCGCCTTCAGAATCCAAAGTTGGACAATGTTGGTGGGACTGTCCAGGAAAAGCTTGAAAATTTCTCAAATGAGCTGTATGAAATGAGATTCAACATGAAAACTGGTGAAGCTTCTCAAAAGAAACTATCAGCATCTGCTGTAGATTTTCCTAGGGTGAATGAAAACTACACTGGCAGGAAGCAGCGATATGTGTATGGGACCACATTAGACAGCATTGCAAAAGTTACTGGTATTATTAAATTTGATTTGCATGCCGAACCAGATCATGGAAAAGAAAAGCTTGAAGTTGGAGGAAATGTTCAGGGTCTCTATGACTTGGGACCAGGAAAGTTTGGCTCTGAAGCTGTTTATATCCCTCGTGTCCCCGGAATTGAGTCTGAAGAAGATGATGGATACTTGGTCTTGTTTGTACATGATGAAAATGCCGGAAAATCATTTGTGCATGTCATTGATGCAAAAACAATGTCAGCAGATCCTGTTGCGGTTGTGGAATTGCCCAATAGAGTTCCATATGGTTTCCATGCCTTCTTTGTGACTGAGGAACAATTGCAAGAACAAGCAAAACTGTGA 1677 0.4132 MRISLSFVAVSSFWQMGDDGKKNGGEGGLVKVDPKPSNGFTSKVIDLLEKLVVKFLYDSSLPHHYLTGNFGPVTETPPTKDLPVKGHLPDCLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVKTSRLKQEEYFGQSKFMKIGDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTANTALVYHHGKLLALSEADKPYAIKVFEDGDLQTLGMLDYDKRLGHSFTAHPKVDPFTGEMFSFGYAHTPPYITYRVISKDGYMHDPVPITISDPIMMHDFAITENYAVFMDLPLIFRPKEMVKNKTLIFSFDSTRKARFGVLPRYAKDEQHIRWFELPNCFIFHNANAWEEEDEVVLITCRLQNPKLDNVGGTVQEKLENFSNELYEMRFNMKTGEASQKKLSASAVDFPRVNENYTGRKQRYVYGTTLDSIAKVTGIIKFDLHAEPDHGKEKLEVGGNVQGLYDLGPGKFGSEAVYIPRVPGIESEEDDGYLVLFVHDENAGKSFVHVIDAKTMSADPVAVVELPNRVPYGFHAFFVTEEQLQEQAKL 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02225 558 Pfam Retinal pigment epithelial membrane protein 73 547 IPR004294 GO:0016702
Phco9g02225 558 PANTHER BETA-CAROTENE DIOXYGENASE 74 549 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02225 Phco-Chr9 47610480 47617307 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02225 9 47610480 47617307 Phco9g02225 9 47610480 47617307 ECH