Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02223 ATGATTGGGGTAACATGGATGTGTTTGAATCTGGATGATCTGATTTTTTACAAGAGAGGAAAGACCCTCTTATCCTTCACTGAAACTCCCTTACACATATCAGCTTTACTTGGCCACCTTGATTTCACAAAGTCCCTTCTAACTCACAAACCTCAACTTGCTCTTGAGATGGACCACTGCAAACGCACCCCTCTTCATCTGGCCTCTGCAGAAGGCCATACCGAGATTGTTCATGTGTTGTTGCAAACATGTGAAGATGCATGCTTGGTGAGTGACCAAGATGGAAGAATCCCTCTTCATTATGCAACTATGAGAGGAAGAACAGAGGTTGCAAGAAAGTTGATTGGTGGAGCAAAGTCAGAATCAGTTATGGTGTTTGATGGATCAGGAAAAACTATGTTTCACCTTTGTGTTGAGCACAATCACTTGGATACCTTGAAGACATTGGTGCAAGTTGGAGATGTTAGCGAGGATTTTCTTAACACTGGAGACTTACATCATGGAAATACCATTCTCCATCTGGCTGTTATGTTCAAGCAAATTGAGACTGTAAGGTTCCTGCTCTCAATATCCAAAATAAAAGAAGAAGCAAATACTGAGAACAAGATGGGTTATACTGCTTTGGACATTATAGAGCAGGTTCCAAAAGACACGAGAAGTCTTCAAATAAAACTCATGTTGATGGATGCTGGATTCAAGAACAATGAAAAGAGCCAAGTACATCATCTACAATCTGCATCAATCATAGATGTTACTCCATCAAGGACACTGAACCCAAATGAAAAGTTTTGGAGAAAGTCTTTGAAGCGTGTGAACAAGCTCTTACAACAAAAGAGTGGTAGGTTGGAAGAAATGAGAGGGATGTTGAGTTTGGTGGCTACAATGATCTCAACCTTGACCTTTGGTGTTGTGGTGAATGCACCAGATACTAAAGTATATTTCCGTCCGTTGTTCAGAAACTTCTTAATGATGAACTCCATCTCTTTCATTGCATCACTTGGTGTGACTCTCTTACTTATAAGTGGAATTCCCTTAAAGAATGAAGTCACAATGGGGATTTTATCAGTTGGGACAGGTGTCTGTCTCACATTTCTTGTGCTTACTTACATACATGCTGTGCCTATGCGTCGTGGGCACGAAGATTCTGTGTTGTTTTCTTGGCTTGGACTTTTTGGGGCAATAGTTGTGTTTACCATAATTGCGCAAATTGCAACCCCTATCACAGACCCAACTCAACTCTCTCTGCCTCAGATACAATAA 1260 0.4087 MIGVTWMCLNLDDLIFYKRGKTLLSFTETPLHISALLGHLDFTKSLLTHKPQLALEMDHCKRTPLHLASAEGHTEIVHVLLQTCEDACLVSDQDGRIPLHYATMRGRTEVARKLIGGAKSESVMVFDGSGKTMFHLCVEHNHLDTLKTLVQVGDVSEDFLNTGDLHHGNTILHLAVMFKQIETVRFLLSISKIKEEANTENKMGYTALDIIEQVPKDTRSLQIKLMLMDAGFKNNEKSQVHHLQSASIIDVTPSRTLNPNEKFWRKSLKRVNKLLQQKSGRLEEMRGMLSLVATMISTLTFGVVVNAPDTKVYFRPLFRNFLMMNSISFIASLGVTLLLISGIPLKNEVTMGILSVGTGVCLTFLVLTYIHAVPMRRGHEDSVLFSWLGLFGAIVVFTIIAQIATPITDPTQLSLPQIQ 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02223 419 ProSiteProfiles Ankyrin repeat region circular profile. 167 189 - -
Phco9g02223 419 Gene3D - 21 222 IPR036770 -
Phco9g02223 419 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 29 400 - -
Phco9g02223 419 ProSiteProfiles Ankyrin repeat profile. 60 92 IPR002110 GO:0005515
Phco9g02223 419 Pfam Ankyrin repeats (3 copies) 26 82 IPR002110 GO:0005515
Phco9g02223 419 Pfam Ankyrin repeats (3 copies) 94 153 IPR002110 GO:0005515
Phco9g02223 419 ProSiteProfiles Ankyrin repeat region circular profile. 60 82 - -
Phco9g02223 419 Pfam Domain of unknown function 281 372 IPR026961 -
Phco9g02223 419 Pfam Ankyrin repeat 167 188 IPR002110 GO:0005515
Phco9g02223 419 SUPERFAMILY Ankyrin repeat 27 212 IPR036770 -
Phco9g02223 419 ProSiteProfiles Ankyrin repeat region circular profile. 94 115 - -
Phco9g02223 419 ProSiteProfiles Ankyrin repeat profile. 167 189 IPR002110 GO:0005515
Phco9g02223 419 ProSiteProfiles Ankyrin repeat profile. 94 115 IPR002110 GO:0005515
Phco9g02223 419 SMART ANK_2a 167 196 IPR002110 GO:0005515
Phco9g02223 419 SMART ANK_2a 60 89 IPR002110 GO:0005515
Phco9g02223 419 SMART ANK_2a 26 55 IPR002110 GO:0005515
Phco9g02223 419 SMART ANK_2a 94 125 IPR002110 GO:0005515
Phco9g02223 419 SMART ANK_2a 129 157 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02223 Phco-Chr9 47590745 47596703 Dispersed