Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02220 ATGGCGGAGCAAGGCAGCGCCGCCGTCAACGACGGCGAAACAGAACCGCAACAAAACGAACACCACCTCCTCAACAACCACAACGACAACAACGAGGTAGACAATAACGAGAAGAGTTCAGATCCAGAGTTGTTCTGCTGTTTGCTTCAGCCAGTCACCGCCGACGCCGATCCCGAGTACATTGGCGTTCGCCGCCTCCTCCTTCTTCGGAAGGCGGAGGCTGGAATTATCCGCCGCAGAGATTGGAGATGCAATGAGAAAACTTATGTGGCATACCGGAATTACATAAGTAGGTCTAGAAACTGGGAAAGGGATAGTTCGCGAGCCCCTAGTCTGCAGAGTACTCCAGGAAACAGTGGCCGATTTTTTCCATCTCCAACTCCACACTCCCGTTGGTCTGAGGTGGATAGCTTGAGTTCTGGGAGGGATCTGCAAAATGCAAATCCAGTACATAATCATAGATTGAGTTTTGGCTCAACTGTAAGTGATTCTGATCATCCTAGACACCGTAGGGCTGAGTCTGCTTATTCTTTTGTTGGAATGCATTGTATCTTTGACAAGTGCAAAGCCTCTGTTACCGTGTTGAAGTTTGGGCACATGAGTTCTGATCTACTTGCTTATGGAGCATCTGATGGAACCTTGACTGTCTGCAGTGTATCAGAGAATCCTTCGGTCATCAAACAACTGGAAGGGCATTCCAAAGATGTAACAGATTTTGATTTTACATCAAATAATCAATACATTGCATCGTCTTCATTGGATAAAACTGTGAGAGTATGGGAGATAGCGAAAGGTATTTGCATACGGGTGATATATGGAGTATGTCCACAATTGTGTATCCGTTTTCACCCTGTAAATAATAACTTCCTTTCAGTTGGAAATGCAAACAAAGAAATCAACGTGTTCAATTTTAGTACCGGAAGGGTAATTAATAAATCACTATTTGACAGTGAAGTTACCTCTTTGGACCATGACCATACAGGACTTCTCATATTTTGTGGAGATGCACAGGGATGTATATACTCAGTAAATATGAACTCTCACACCGGTGTATTATCTCGCTCGCATCGTTATCGAAGTAGTAGCAAGCAAAAATCTCCTGTTACCACAGTGCAGTATAGGAGTTTCTCTCTGCTAGCTCGCGGACCTGTGTTGTTGACATGTACCCAGGATGGAAACCTGTCTTTCTTCAGTGTGGCTTTGGAGATAAATGGCTATTTAACTCTTCGATGCTCTCTAAAATTAGCTCCACGTATACACAAAATTCAAGCTTCTTTCTGTCCTCTCCTATCCCTTGAAAAAGGAGAATTCATAGTTGCTGGAAGTGAGGACTCAAATGTCTACTTTTATGATTTAACTCGGCCCAAAAATACATGTGTGAACAAGCTACAGGGTCATCGATTTCCTGTGATGGGTATTGCCTGGAACCATGGAGAAAATTTATTGGCTTCATCTGATTTTTATGGCGTAGTAATTGTGTGGAAGAGAGAAAGAACAAAACAAAACAAATATACACAACAATAG 1524 0.4311 MAEQGSAAVNDGETEPQQNEHHLLNNHNDNNEVDNNEKSSDPELFCCLLQPVTADADPEYIGVRRLLLLRKAEAGIIRRRDWRCNEKTYVAYRNYISRSRNWERDSSRAPSLQSTPGNSGRFFPSPTPHSRWSEVDSLSSGRDLQNANPVHNHRLSFGSTVSDSDHPRHRRAESAYSFVGMHCIFDKCKASVTVLKFGHMSSDLLAYGASDGTLTVCSVSENPSVIKQLEGHSKDVTDFDFTSNNQYIASSSLDKTVRVWEIAKGICIRVIYGVCPQLCIRFHPVNNNFLSVGNANKEINVFNFSTGRVINKSLFDSEVTSLDHDHTGLLIFCGDAQGCIYSVNMNSHTGVLSRSHRYRSSSKQKSPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEINGYLTLRCSLKLAPRIHKIQASFCPLLSLEKGEFIVAGSEDSNVYFYDLTRPKNTCVNKLQGHRFPVMGIAWNHGENLLASSDFYGVVIVWKRERTKQNKYTQQ 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02220 507 MobiDBLite consensus disorder prediction 106 162 - -
Phco9g02220 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 229 270 IPR001680 GO:0005515
Phco9g02220 507 Gene3D - 173 275 IPR015943 GO:0005515
Phco9g02220 507 ProSiteProfiles Trp-Asp (WD) repeats profile. 463 504 IPR001680 GO:0005515
Phco9g02220 507 SMART WD40_4 456 495 IPR001680 GO:0005515
Phco9g02220 507 SMART WD40_4 222 261 IPR001680 GO:0005515
Phco9g02220 507 SMART WD40_4 364 398 IPR001680 GO:0005515
Phco9g02220 507 SMART WD40_4 178 218 IPR001680 GO:0005515
Phco9g02220 507 SMART WD40_4 264 303 IPR001680 GO:0005515
Phco9g02220 507 SMART WD40_4 415 451 IPR001680 GO:0005515
Phco9g02220 507 SMART WD40_4 306 344 IPR001680 GO:0005515
Phco9g02220 507 Gene3D - 425 506 IPR015943 GO:0005515
Phco9g02220 507 MobiDBLite consensus disorder prediction 15 39 - -
Phco9g02220 507 PANTHER WD REPEAT PROTEIN 26-RELATED 147 498 - -
Phco9g02220 507 Coils Coil 503 507 - -
Phco9g02220 507 Pfam WD domain, G-beta repeat 226 260 IPR001680 GO:0005515
Phco9g02220 507 Pfam WD domain, G-beta repeat 458 495 IPR001680 GO:0005515
Phco9g02220 507 Gene3D - 276 424 IPR015943 GO:0005515
Phco9g02220 507 SUPERFAMILY WD40 repeat-like 184 495 IPR036322 GO:0005515
Phco9g02220 507 ProSitePatterns Trp-Asp (WD) repeats signature. 248 262 IPR019775 -
Phco9g02220 507 MobiDBLite consensus disorder prediction 103 168 - -
Phco9g02220 507 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 229 262 - -
Phco9g02220 507 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02220 Phco-Chr9 47563522 47570227 Transposed