Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02218 ATGGCTTCTCCTCCTTTTTCTTACGCCGTTGTAAAGGATGCAAAAGTGCTTATGGTTGGTGCTGGTGGAATTGGCTGCGAGCTTCTCAAGACTCTCGCTCTCTCCGGTTTTCCTGACATTCACATCATTGACATGGATACTATAGAAGTCAGTAACCTGAATAGACAATTTTTATTTCGACAATCTCATGTTGGGCAATCTAAAGCTAAAGTTGCTAGGGATGCTGTGTTAAAATTTAGGCCTCACATAGACATTACACCATACCATGCAAATGTCAAAGATCCTGAATTCAATGTGGACTTCTTTAAGCAATTTAATGTTGTTCTAAATGGACTTGACAATCTAGATGCACGCCGGCATGTGAATCGCTTGTGCCTGGCAGCTAATGTTCCTTTGGTTGAAAGTGGAACTACTGGGTTCCTTGGACAGGTAACTGTACATGTCAAGGGAAGAACAGAGTGCTATGAATGTCAGCCTAAACCAGCCCCCAAGACATATCCTGTCTGTACTATCACAAGTACCCCATCAAAGTTTGTTCACTGTGTTGTGTGGGCAAAGGACCTACTTTTTGCCAAGTTATTTGGGGATAAGAATCAGGATAATGACTTGAATGTTCGATCAAGTGATGGTGCTAGTTCCTCAGAAAATGTAGATGATGTATTTGAACGTAGGAAAGATGAAGACATTGATCAATATGGAAGGAAAATTTTCGATCATGTATTTGGGTATAATATTGAATTGGCCTTGTCTAATGAAGAGACATGGAAAAATCGTAATAGACCAAAGCCTATATACAGCAAGGATGTTCTGTCTGATGAACTGGCTCAACAAAATGGAAATTTGGAGAAAAATTGTGCCTGTGATGATGAATTATCAGTATCTGCCATGACATCTTTGGGTATGAAGAATCCACAGGATATTTGGAGTCTCAGAGAAAATTCTAAAATATTTCTTGAAGCATTGCGAATATTTTTTACAAAAAGGGAAAAGGAGGTTGGCAATCTAGGGTTTGATAAAGATGATCAGTTGGCTGTTGAATTTGTTACTGCAGCTGCAAACATACGGGCTGCTTCCTTTGGCATCCCTCTGCACAGCCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCTGTTGCGACTACAAATGCTGTTATTGCTGGATTGATTGTCATTGAAGCAATCAAAGTGCTGCAAAATGACATTGAAAGTTGTAGAATGACATATTGTCTGGAACATCCATCAAGAAACATGCTGCTTATGCCTGTGGAGCCATTTGAACCTAACAAGTCTTGTTATGTTTGTTCCGAGACACCTTTATCCCTTGAAATAAACACCAACCGTTCAAAGTTGAAAGACTTAGTCGAAAAAATTGTTAAGGCAAAACTAGGGATGAACATTCCTCTAATTATGTGTGCTTCAAACCTCCTTTATGAAGCTGGTGATGTTGAGGACGACATGATTGCCATTTATGAAGCCAACCTTGAAAAGGTCCTGGCTGAGCTTCCTTCTCCAGTAACTGGTGGAACAATGCTTACGGTGGAGGATATGCAACAGGAATTTGTTTGCAATATTAACATCAAACACAGAGAGGAGTTTGATGAAGAGAAAGAACCTGATGAGATGGTTCTCTTAGGATGGATTCAACCAGTGTCAGCAGCAGAAAATAAAGACAAATCTGTTGACAATGGTGGAAGCACCACCTCTGATGCAGTAGTAACAGCTGTGGAATCTGAGAAGGATGATGAGATAACTATAGTTTCTACCTTGAAGAAGCGAAAGCTTCCAGATGAAATTGACATTTCAAGTGCCCCTGCTGACGTGAAGCATCAAAAGCAGTTGGAAGTAATCGATGACGAAGACGATCTTGTCATGCTTGATGGGGATTTAGACAGCTTTAAAAAGAGAAGATTGTCATAG 1923 0.4004 MASPPFSYAVVKDAKVLMVGAGGIGCELLKTLALSGFPDIHIIDMDTIEVSNLNRQFLFRQSHVGQSKAKVARDAVLKFRPHIDITPYHANVKDPEFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAANVPLVESGTTGFLGQVTVHVKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCVVWAKDLLFAKLFGDKNQDNDLNVRSSDGASSSENVDDVFERRKDEDIDQYGRKIFDHVFGYNIELALSNEETWKNRNRPKPIYSKDVLSDELAQQNGNLEKNCACDDELSVSAMTSLGMKNPQDIWSLRENSKIFLEALRIFFTKREKEVGNLGFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLQNDIESCRMTYCLEHPSRNMLLMPVEPFEPNKSCYVCSETPLSLEINTNRSKLKDLVEKIVKAKLGMNIPLIMCASNLLYEAGDVEDDMIAIYEANLEKVLAELPSPVTGGTMLTVEDMQQEFVCNINIKHREEFDEEKEPDEMVLLGWIQPVSAAENKDKSVDNGGSTTSDAVVTAVESEKDDEITIVSTLKKRKLPDEIDISSAPADVKHQKQLEVIDDEDDLVMLDGDLDSFKKRRLS 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02218 640 FunFam SUMO-activating enzyme subunit 2 4 109 - -
Phco9g02218 640 Pfam Ubiquitin-activating enzyme, SCCH domain 317 370 IPR019572 -
Phco9g02218 640 PIRSF SUMO_E1B 5 621 IPR030661 GO:0016925|GO:0019948
Phco9g02218 640 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 443 534 IPR028077 -
Phco9g02218 640 FunFam SUMO-activating enzyme subunit 2 10 184 - -
Phco9g02218 640 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 11 487 IPR045886 -
Phco9g02218 640 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 11 483 IPR035985 GO:0008641
Phco9g02218 640 Gene3D - 437 628 - -
Phco9g02218 640 FunFam SUMO-activating enzyme subunit 164 375 - -
Phco9g02218 640 CDD Uba2_SUMO 15 436 - -
Phco9g02218 640 Gene3D - 8 109 IPR042449 -
Phco9g02218 640 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 164 375 IPR023318 -
Phco9g02218 640 Pfam ThiF family 11 434 IPR000594 -
Phco9g02218 640 FunFam SUMO-activating enzyme subunit 378 411 - -
Phco9g02218 640 FunFam SUMO-activating enzyme subunit 437 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02218 Phco-Chr9 47543112 47549531 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02218 9 47543112 47549531 Phco9g02218 9 47543112 47549531 ECH