Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02206 ATGGCCTTGGAGTTTGAACACAGTGTGAATGAGAAAAGGAAAGAAAATCAATGTAATAAATTATTGTCTGAAAAAAGCCACAAACCTTATCGGATTTCAAGGCTTGGATTGCTTTCTTCATCACACCATCATAGTAAACACTTTAGAGAACACACACTTTCATCTATGGCTACCCTTATTGCCCCCAGCAACCACTCTCCCCAAGAAGATGCTGAAGCTCTCAGAAAGTCTTTTGAAGGATGGGGTACTGATGAGAACTCTATAATAGCAATTTTGGGTCATAGAACTGTTCATCAGAGGCAACAAATCAGAAGAGTTTATGAGGAAATTTACCAGGAGGATCTTGTGAAGCGCTTGGAGTCTGAGATCAAAGGAGACTTTGAGAAAGCTGTGTACCGATGGATACTGGAACCTGCAGATCGTGATGCTGTTTTGGCCAATGTTGCCATCAAGAGTGGCAAAAACTACAATGTCATTGTGGAAATTGCCACTATCCCCTCCCCAGAAGAGCTTTTGGCTGTCAGACGTGCTTATCTCCACCGCTACAAGCACTCTTTGGAAGAAGATCTTGCAGCACATACCACTGGCCATCTACGCCAGCTTTTAGTGGGGTTGGTGACCTCATTCAGATATGTTGGTGATGAGATCAATCCAAAATTGGCACAAAATGAGGCTGAAATTCTTCATGATGCTGTGAAAGAGAAGAAGGGTTCCTATGAAGAGGCCATCAGGGTCTTGACTACAAGGAGCAAGACTCAACTGGTTGCAACTTTCAACCGCTACAGAGAGATCCATGGCACTTCCATCTCTAAGAAACTGGTGGATGAAGGATCTGATGATTTTGAGAAGGCGTTGCACACCACCATCCGTTCCATCAATGATCATTTCAAGTACTATGAAAAGGTGGTGAGAAATGCTATCAAGAAGGTTGGAACTGATGAGGATGCACTCACCCGTGTGGTTGTGAGTAGGGCTGAGAAGGATCTGAAAACAGTCTCAGAGGTTTACTACAAGAGAAACAGTGTTCTTCTTGAGCATGCCATTGCCAAGGAAATTTCAGGGGATTACAAGAAGTTCCTTCTCACTCTGTTGGGGAAAGAGGACTAA 1107 0.4354 MALEFEHSVNEKRKENQCNKLLSEKSHKPYRISRLGLLSSSHHHSKHFREHTLSSMATLIAPSNHSPQEDAEALRKSFEGWGTDENSIIAILGHRTVHQRQQIRRVYEEIYQEDLVKRLESEIKGDFEKAVYRWILEPADRDAVLANVAIKSGKNYNVIVEIATIPSPEELLAVRRAYLHRYKHSLEEDLAAHTTGHLRQLLVGLVTSFRYVGDEINPKLAQNEAEILHDAVKEKKGSYEEAIRVLTTRSKTQLVATFNRYREIHGTSISKKLVDEGSDDFEKALHTTIRSINDHFKYYEKVVRNAIKKVGTDEDALTRVVVSRAEKDLKTVSEVYYKRNSVLLEHAIAKEISGDYKKFLLTLLGKED 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02206 368 Pfam Annexin 302 363 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 Pfam Annexin 70 131 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 Pfam Annexin 145 205 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 Pfam Annexin 224 286 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 ProSiteProfiles Annexin repeat profile. 137 207 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 FunFam Annexin 56 136 - -
Phco9g02206 368 SMART annex3 311 363 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 SMART annex3 153 205 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 SMART annex3 82 134 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 SMART annex3 237 288 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 FunFam Annexin 137 206 - -
Phco9g02206 368 ProSitePatterns Annexin repeat signature. 311 363 IPR018252 GO:0005509|GO:0005544
Phco9g02206 368 ProSiteProfiles Annexin repeat profile. 219 290 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 Gene3D Annexin 137 206 IPR037104 GO:0005509|GO:0005544
Phco9g02206 368 PRINTS Annexin family signature 119 135 IPR001464 GO:0005509|GO:0005544
Phco9g02206 368 PRINTS Annexin family signature 79 101 IPR001464 GO:0005509|GO:0005544
Phco9g02206 368 PRINTS Annexin family signature 307 327 IPR001464 GO:0005509|GO:0005544
Phco9g02206 368 PRINTS Annexin family signature 351 364 IPR001464 GO:0005509|GO:0005544
Phco9g02206 368 Gene3D Annexin 296 368 IPR037104 GO:0005509|GO:0005544
Phco9g02206 368 FunFam Annexin 219 293 - -
Phco9g02206 368 Gene3D Annexin 47 136 IPR037104 GO:0005509|GO:0005544
Phco9g02206 368 ProSiteProfiles Annexin repeat profile. 294 365 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 SUPERFAMILY Annexin 58 368 IPR037104 GO:0005509|GO:0005544
Phco9g02206 368 PRINTS Plant annexin signature 214 234 IPR009118 -
Phco9g02206 368 PRINTS Plant annexin signature 279 297 IPR009118 -
Phco9g02206 368 PRINTS Plant annexin signature 172 186 IPR009118 -
Phco9g02206 368 ProSiteProfiles Annexin repeat profile. 65 136 IPR018502 GO:0005509|GO:0005544
Phco9g02206 368 FunFam Annexin 295 366 - -
Phco9g02206 368 Gene3D Annexin 219 293 IPR037104 GO:0005509|GO:0005544
Phco9g02206 368 PANTHER ANNEXIN 59 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02206 Phco-Chr9 47459515 47462195 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02206 9 47459515 47462195 Phco9g02206 9 47459515 47462195 ECH
Phco10g00294 10 2736307 2738291 Phco9g02206 9 47459515 47462195 PCT