Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02197 ATGATCCACCGTGACTCATCAAAATCACCATTCTATAACTCCACAGAAACTCAGTTCCAACGAATTGCCAATGCCCTGATTCGTTCCATTATCCGTGTGAACCATTTCAACAAATCTTTTGTGTCTGCAAACACACCTCAGGCACCTGTAACCTCGGCTCAAGGAGAATATCTAATGAGTTATTCTGTTGGAACCCCACCACTCCAAGTCTATGGAATTATTGATACTGGGAGTGAAATTACTTGGCTGCAATGCCAACCATGTCAAACATGTTTCAAGCAAATCTCTCCTATCTTTGATCCTTCAAAATCCAAAACCTACGAAACCATCGGTTGCACTACTGATACATGTCGTTCTGTACTAGGTTCCTCTTGCCCTTCACGCACCAGCAATTGTAAATATACTATTAGATATGGTGATGGGTCATACTCACAAGGTGATCTTAGTTTTGAGACCCTTACCTTGGCCTCCACCAATGGCTCACCTGTCAAAATTCCTAGATTTGAAATAGGATGTGGTCACAGAAATTATCTTTACTTTAAACGTGGAGGTTGTGGCATAGTTGGCCTAGCACGTGCACCAGTGTCTTTTGTAAATCAATTGGGTCCATCAATAGGTGGAAAGTTTTCTTATTGTTTGGTACCAATACTTTCACCAACTAGTACATCTAGCAAACTCAATTTTGGAAATGCTGCTGTGGTGTCTGGGCGTGGCACTGTCTCAACCCCCTTATATTCACGATTTGGAGAACCATTTTACTACCTAAACTTAGAAGCAATTAGTGTGGGAAGCAATAGAATAGAGGTTGGAAGCTCTTTACCTAGAGCTGGTGGAAAGGGAAATATCATAATAGACTCAGGTACAACACTCACTTTTCTACCAAATGATGTTTACTCAAAGTTGGAATCAACTGTTGCAAGGGTTGTTAAGATGCAACCTGCTAAGGATCCAAGTCAAATGTTGAGCCTTTGTTACAAAGTATATGATAGACCATATGTACCAGTGATCACAGCACATTTTACTGGTGCAGATGTCATTTTATATGATTCCAACACCTTTCTTAAAGTGGCTGATGGTGTTGTGTGCTTGGCATTCCTGCCAAGTCATAGAGCTATCTTTGGGAACTTGGCTCAGCAAAACATGTTGGTTGGTTATGATCTTCAGAAGAACACAGTGTCCTTTAAGCTTGCGGATTGCACGAAGCAGTGA 1209 0.4119 MIHRDSSKSPFYNSTETQFQRIANALIRSIIRVNHFNKSFVSANTPQAPVTSAQGEYLMSYSVGTPPLQVYGIIDTGSEITWLQCQPCQTCFKQISPIFDPSKSKTYETIGCTTDTCRSVLGSSCPSRTSNCKYTIRYGDGSYSQGDLSFETLTLASTNGSPVKIPRFEIGCGHRNYLYFKRGGCGIVGLARAPVSFVNQLGPSIGGKFSYCLVPILSPTSTSSKLNFGNAAVVSGRGTVSTPLYSRFGEPFYYLNLEAISVGSNRIEVGSSLPRAGGKGNIIIDSGTTLTFLPNDVYSKLESTVARVVKMQPAKDPSQMLSLCYKVYDRPYVPVITAHFTGADVILYDSNTFLKVADGVVCLAFLPSHRAIFGNLAQQNMLVGYDLQKNTVSFKLADCTKQ 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02197 402 Gene3D Acid Proteases 36 228 IPR021109 -
Phco9g02197 402 Pfam Xylanase inhibitor C-terminal 253 395 IPR032799 -
Phco9g02197 402 PANTHER OS07G0603500 PROTEIN-RELATED 1 400 - -
Phco9g02197 402 Gene3D Acid Proteases 229 402 IPR021109 -
Phco9g02197 402 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 282 293 IPR001969 GO:0004190|GO:0006508
Phco9g02197 402 FunFam Aspartic proteinase CDR1 231 402 - -
Phco9g02197 402 FunFam Probable aspartic protease At2g35615 36 229 - -
Phco9g02197 402 CDD pepsin_A_like_plant 56 399 IPR034161 -
Phco9g02197 402 Pfam Xylanase inhibitor N-terminal 57 230 IPR032861 -
Phco9g02197 402 SUPERFAMILY Acid proteases 52 399 IPR021109 -
Phco9g02197 402 ProSiteProfiles Peptidase family A1 domain profile. 57 395 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02197 Phco-Chr9 47400490 47401698 Tandem