Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02192 ATGACAACAATTTCACATTCCTCTCTCACTATTCTTTTACTGTGTCTTTGTTACGTCTCTTTCTTAGAGGCTCTCAATGGTGGTTTTACTGTGGAGATCATACACCGTGACTCACCAAAATCACCATTCTATCGTCCCACAGAAACTCAGTTCCAACGATTTGCCAATGCTGTTCGTCGCTCCATTCATCGTGCTAACCATTTCAACCAAACTTTTGTCTCTCCAAACACAGTTGAGTCCAATGTAACACTAGACATAGGGGACTACGTCATGAGCTATTCAGTTGGAACCCCAGAGTTCCAAGTTTTTGGCATTGTTGACACTGGCAGTGATATAATTTGGCTACAGTGTCAACCTTGTAAAACTTGTTACGACCAAACCACTCCAATTTTCAATTCTTCAAAATCCAAGACCTACAAAACCCTTCCTTGTTCTTCTAGTTCATGTAAATCAGTGTATAACACTTGTTCTTCTCCTCAAGAGAAAAGTTGTGAATATAGTATTAGGTATGAGGATGGTACATACTCAGAAGGAGATCTTAGTTTGGAGACACTCACTTTAGGCTCCACTAATGGCTCTTCTGTGCAATTTCCTAGAACTGTGATAGGATGTGGACGTAACAATAGTTTTTCCTCTGAACAGATAAGTTCTGGCATAGTTGGTTTAGGAAGTGGACCAGTGTCTCTAATATCTCAATTGAGTTCTTCAATAAGTGGAAGGTTTTCCTATTGTTTTGCACCAATAGATGACATACCTAGCCAACTCAGTTTTGGAGATGCTGCTGTGGTTACTGGGAGAGGCACTGTTTCCACCCCAATAGGTTATCATGATCAAGAGACACATTACTACCTAACCTTGGAAGCACTGAGTGTTGGAAACAACAGAATAAAGTTTAGGAACTCCTCATCTGAATCTAAAGGAGAGGGAAATATCATAATTGACTCAGGTACAACACTCACTCTTTTGCCAGGTGATGTTTACTCCAAGTTGGAATCAGCAGTAGCAAAGGAAATTGAATTAGATCGTGTTGAGGATCCATTTAGTCAGTTGAGCCTTTGCTATAGAGGTAAATTTCATGAACTACATGCACCAGTGATAACAGCACATTTTAGAGGTGATGCAGATGTGAAGTTAAATGTTGACAAGTCCTTTATTGATGCGGGTGATGGGGTAGTTTGCTTTGCTTTCATGGCAAGTGAAACTTTTTCCATCTTTGGAAACATGGCTCAGAGAAACCTCATGGTTGGCTATGACCTGCAGAAGAAAACAGTCTCCTTTAAGCCCACAGATTGTACTAAACAGTGA 1305 0.4031 MTTISHSSLTILLLCLCYVSFLEALNGGFTVEIIHRDSPKSPFYRPTETQFQRFANAVRRSIHRANHFNQTFVSPNTVESNVTLDIGDYVMSYSVGTPEFQVFGIVDTGSDIIWLQCQPCKTCYDQTTPIFNSSKSKTYKTLPCSSSSCKSVYNTCSSPQEKSCEYSIRYEDGTYSEGDLSLETLTLGSTNGSSVQFPRTVIGCGRNNSFSSEQISSGIVGLGSGPVSLISQLSSSISGRFSYCFAPIDDIPSQLSFGDAAVVTGRGTVSTPIGYHDQETHYYLTLEALSVGNNRIKFRNSSSESKGEGNIIIDSGTTLTLLPGDVYSKLESAVAKEIELDRVEDPFSQLSLCYRGKFHELHAPVITAHFRGDADVKLNVDKSFIDAGDGVVCFAFMASETFSIFGNMAQRNLMVGYDLQKKTVSFKPTDCTKQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02192 434 FunFam Probable aspartic protease At2g35615 68 258 - -
Phco9g02192 434 Pfam Xylanase inhibitor C-terminal 281 427 IPR032799 -
Phco9g02192 434 ProSiteProfiles Peptidase family A1 domain profile. 89 427 IPR033121 -
Phco9g02192 434 CDD pepsin_A_like_plant 89 431 IPR034161 -
Phco9g02192 434 Pfam Xylanase inhibitor N-terminal 89 259 IPR032861 -
Phco9g02192 434 Gene3D Acid Proteases 64 258 IPR021109 -
Phco9g02192 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 104 115 IPR001969 GO:0004190|GO:0006508
Phco9g02192 434 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 311 322 IPR001969 GO:0004190|GO:0006508
Phco9g02192 434 PANTHER OS07G0603500 PROTEIN-RELATED 31 432 - -
Phco9g02192 434 FunFam Aspartic proteinase CDR1 260 434 - -
Phco9g02192 434 Gene3D Acid Proteases 259 434 IPR021109 -
Phco9g02192 434 SUPERFAMILY Acid proteases 85 431 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02192 Phco-Chr9 47376595 47377899 Dispersed/Proximal