Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02169 ATGGAATACAGTCTGCACCAACCACAGAGTCTTAACTTCAGAGTCAAGACCATGAAAACCTCACCTATACTTACTCCTTTGGTGCTCTTCCTCCTCTTCTCCCTAGCCAAAGGGCAGAACCCTAAATGTGATGTCCATGACCATGGCTCAACCCTTAAAGTGTTCCATGTGTTCAGCCCTTGCTCCCCATTTAGGCCCTCAGAGGAAATGTCATGGGAGGAGAGTGTCCTACAGCTACAAGCCAAGGACCAGGACAGGATGCAGTACCTGTCCAACTTGGTAGCTAGGAGGTCAATTGTCCCAATTGCTTCAGGCAGACAAATCACACAGAGCCCTACCTACATTGTGAAGGCCAAGATTGGTACCCCAGCTCAGACCCTTCTCTTGGCCATGGACACCAGCAATGATGCTGCTTGGGTCCCTTGCACTTCCTGTGTTGGTTGCTCAACACTAAAACCCTTTGCCCCTGCCAAATCCACCACTTTCAAGAAACTTGCATGCAGTGCTCCACAGTGCAAACAGGTACCGAACCCCACTTGCGATGGAAGCGCGTGTGCTTTCAACTTCACTTATGGCACTTCCTCCGTGGCTGCTAGTCTTGTCAAGGACACAGTTACCCTAGCCACTGACCCAGTTCCAGGCTACACCTTTGGGTGCGTTCAAAAAGCAACAGGGAGCTCAATTCCAACACAAGGTCTATTGGGCCTGGGCCGAGGCCCATTGTCACTCTTGGCCCAAACCCAAAATCTCTACCGATCTACATTCTCCTACTGCTTGCCCAGCTTCAAAACACTCAACTTTAGTGGGTCACTGAGACTTGGGCCTGTGGCCCAGCCCAAGAGGATCAAGTTCACCCCTCTTCTCAAAAACCCTAGAAGGTCATCGCTGTATTATGTGAACTTGGTGGCCATTAGAGTTGGCCGGAGAATTGTTGATATCCCGCCGGAGGCTTTAGCGTTCAACCCCACCACCGGTGCCGGCACCATTTTTGATTCCGGTACGGTGTTCACCCGGCTGGTTGAACCGGCCTACACCGCCGTCCGGAACGAGTTCCGGCGGCGAGTCACCATCGGCAAGAAACTCACCGTGACAAGGCTAGGAGGGTTTGACACATGCTACACGGTCCCAATAGTTGCACCGACCATAACGTTTATGTTCTCCGGCATGAACGTAACACTCCCACCGGACAACACCCTCATACACAGCACCGCCGGCAGCATCACGTGCTTGGCGATGGCGGCGGCGCCCGAAAACGTGAACTCGGTGCTGAACGTGATCGCCAACATGCAACAACAAAACCACCGTGTCCTCTACGACGTCCCCAACTCAAGACTCGGCGTTGCTCGTGAACTTTGCACCTAA 1362 0.5279 MEYSLHQPQSLNFRVKTMKTSPILTPLVLFLLFSLAKGQNPKCDVHDHGSTLKVFHVFSPCSPFRPSEEMSWEESVLQLQAKDQDRMQYLSNLVARRSIVPIASGRQITQSPTYIVKAKIGTPAQTLLLAMDTSNDAAWVPCTSCVGCSTLKPFAPAKSTTFKKLACSAPQCKQVPNPTCDGSACAFNFTYGTSSVAASLVKDTVTLATDPVPGYTFGCVQKATGSSIPTQGLLGLGRGPLSLLAQTQNLYRSTFSYCLPSFKTLNFSGSLRLGPVAQPKRIKFTPLLKNPRRSSLYYVNLVAIRVGRRIVDIPPEALAFNPTTGAGTIFDSGTVFTRLVEPAYTAVRNEFRRRVTIGKKLTVTRLGGFDTCYTVPIVAPTITFMFSGMNVTLPPDNTLIHSTAGSITCLAMAAAPENVNSVLNVIANMQQQNHRVLYDVPNSRLGVARELCT 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02169 453 SUPERFAMILY Acid proteases 112 452 IPR021109 -
Phco9g02169 453 FunFam Aspartyl protease AED3 275 453 - -
Phco9g02169 453 Pfam Xylanase inhibitor C-terminal 297 446 IPR032799 -
Phco9g02169 453 Pfam Xylanase inhibitor N-terminal 114 274 IPR032861 -
Phco9g02169 453 ProSiteProfiles Peptidase family A1 domain profile. 114 448 IPR033121 -
Phco9g02169 453 FunFam aspartyl protease AED3 92 274 - -
Phco9g02169 453 Gene3D Acid Proteases 92 274 IPR021109 -
Phco9g02169 453 PANTHER ASPARTYL PROTEASES 30 446 IPR001461 GO:0004190|GO:0006508
Phco9g02169 453 Gene3D Acid Proteases 275 453 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02169 Phco-Chr9 47057261 47061055 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02169 9 47057261 47061055 Phco9g02169 9 47057261 47061055 ECH