Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02167 ATGGGAGTGAAAGAACAAGAGATGGAGGAGGAGAAAGAAGAAACAACCAACCACAACCTAGACCAAACCAAAAACCAAAACCTTAACCTAGACCAAACCAAAAATCAAAACCTTAACCTAGACCAAAACAACCACCCTTCTAACTCTCTCCTCCTCCCAGTCAAGGAAGAGAGTGGTGTGAGATCAAAGGGTTTTGGAGGTGGTGACAGAGTGAAGAGAGATGAATGGAGTGAAGGAGCGGTGTCAACCCTTCTAGAAGCCTATGAAGCCAAATGGGTGCTCAGAAACAGAGCCAAACTCAAGGGCCATGACTGGGAGGACGTGGCCCGGCACGTGTCAGCACGCGCCACCTGCACCAAGTCCCCAAAAACCTCCACACAGTGCAAGAACAAGGTGGAGTCCATGAAGAAGAGGTACAGATCAGAATCTGCAACCGCAGAACATCCCTCCTCATGGCCTCTGTATTCGCGCCTCGAACTTCTTCTCAGGGGAACTGGCCCGCTCCTCTCCTCCCCTCCGCCGCCGCTCACGGTGGCACCCTCGTCCGCAGAACCGCCGCAACCGTCGCCGCCGTCAGAGCCACTTGCGATTGCGCAGAATTCGCATGGATCCAATGGGGTTGATGATAAGCTTGTCAAGGAAGATGTGTTAGCAGCAAAGTCATCTGAGCATGTATCTAGCAAGAATCCATTGGACACAGATAGCAGCACCCCTGCACTTTACAGCAAGAAGGAAGAGATGAGATGTAACAAGAGGAAGAAGAAAGTGATTGAGAACACAGGGAGAAGAAGGAAAGAGTATGTGGAGATAGCAGAAAGCTTAAGATGGCTTGCAGAAGCAATGATAAGGTCAGAAGAAGCAAGAATGGAGACAATGAAGGAGATAGAGAGGATGAGAGTTGAAGCTGAGGCCAAGAGAGGGGAAATGGACCTCAAGAGAACTGAAATAATTGCCAACACACAGTTAGAGATTGCTAGGATCTTTGCTAATGTCAACAAAGGTGTTGATTCATCTCTAAGAATTGGGAGAAGTTAA 1035 0.4879 MGVKEQEMEEEKEETTNHNLDQTKNQNLNLDQTKNQNLNLDQNNHPSNSLLLPVKEESGVRSKGFGGGDRVKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARHVSARATCTKSPKTSTQCKNKVESMKKRYRSESATAEHPSSWPLYSRLELLLRGTGPLLSSPPPPLTVAPSSAEPPQPSPPSEPLAIAQNSHGSNGVDDKLVKEDVLAAKSSEHVSSKNPLDTDSSTPALYSKKEEMRCNKRKKKVIENTGRRRKEYVEIAESLRWLAEAMIRSEEARMETMKEIERMRVEAEAKRGEMDLKRTEIIANTQLEIARIFANVNKGVDSSLRIGRS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02167 344 MobiDBLite consensus disorder prediction 168 193 - -
Phco9g02167 344 Gene3D - 76 141 - -
Phco9g02167 344 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 45 331 IPR044823 -
Phco9g02167 344 MobiDBLite consensus disorder prediction 222 238 - -
Phco9g02167 344 MobiDBLite consensus disorder prediction 166 208 - -
Phco9g02167 344 MobiDBLite consensus disorder prediction 220 240 - -
Phco9g02167 344 FunFam Trihelix transcription factor ASIL2 76 141 - -
Phco9g02167 344 Pfam Myb/SANT-like DNA-binding domain 73 159 IPR044822 -
Phco9g02167 344 MobiDBLite consensus disorder prediction 1 19 - -
Phco9g02167 344 MobiDBLite consensus disorder prediction 1 72 - -
Phco9g02167 344 MobiDBLite consensus disorder prediction 20 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02167 Phco-Chr9 47037502 47040565 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco9g02167 Myb_DNA-bind_4 9.5e-20 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02167 9 47037502 47040565 Phco9g02167 9 47037502 47040565 ECH