Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02150 ATGACTGCTCAATTCATTACCGGTGCTCTTGTAAACCTATGCATAGAATACTGTCCAAGCTTAGAGTCGTTCCCTGATGGAGGTTTGCCATCAAATCTGGACTATCTGACAATAGAAGACTGTCCAAGAGTTGAGTGGTTCCCTGACAGAGGCATCAAGGCTCACCTCCAAAACCTGTACTTCAAAATTCAGTTCCCTGCATCTGAGACTAATTTGTTTTCTGCAAAGGATCCTCTCAGCTTGAGCTTTATAGATCTCTTGTGCAGAGGCATATTAGAGCTGCCTAGACCAGAGTATTTGTGCGAAGTGAAAATGGCTGCCTCAGTTGCAGGGAACGCGACCACGAACACGAGCGCGGGTGTGGAGTGGCACGTGCGTCCTCCAAACCCTAAGAACCCAATCGTCTTCTTCGATGTCACCATCGGCAACATACCTGCTGGTCGAATCAAGATGGAAATCTTCGCCGACATTGCGCCTAAAACCGCCGAGAATTTCAGGCAGTTCTGCACTGGGGAGTACAGAAAAGCTGGACTTCCTGTTGGTTACAAGGGTTGTCAGTTTCATAGAGTGATTAAGGATTTTATGATTCAGGCTGGCGATTTTGTAAAGGGTGATGGTAGTGGATGTGTTTCAATCTATGGACTTAAGCTTGATGATGAAAACTTTACTGCCAAACACACTGGCCCCGGCCTTCTGTCGATGGCAAATAGTGGACCAAATACCAATGGTTGTCAGTTTTTTATAACATGTGCAAAATGCGACTGGCTTGACAACAAGCATGTCGTTTTTGGGAGAGTGCTTGGAGATGGCCTTTTGGTTGTGAGGAAGATTGAGAACGTGGCAACTGGACCCAATAACCGGCCAAAATTAGCTTGTGTCATTGCAGAATGTGGTGAAATGTAA 903 0.4596 MTAQFITGALVNLCIEYCPSLESFPDGGLPSNLDYLTIEDCPRVEWFPDRGIKAHLQNLYFKIQFPASETNLFSAKDPLSLSFIDLLCRGILELPRPEYLCEVKMAASVAGNATTNTSAGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMEIFADIAPKTAENFRQFCTGEYRKAGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGLKLDDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02150 300 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 182 199 IPR020892 GO:0003755|GO:0006457
Phco9g02150 300 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 137 298 IPR002130 GO:0000413|GO:0003755
Phco9g02150 300 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 245 257 IPR002130 GO:0000413|GO:0003755
Phco9g02150 300 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 230 245 IPR002130 GO:0000413|GO:0003755
Phco9g02150 300 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 153 168 IPR002130 GO:0000413|GO:0003755
Phco9g02150 300 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 258 273 IPR002130 GO:0000413|GO:0003755
Phco9g02150 300 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 187 199 IPR002130 GO:0000413|GO:0003755
Phco9g02150 300 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 135 300 - -
Phco9g02150 300 CDD cyclophilin_ABH_like 133 298 - -
Phco9g02150 300 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 136 299 IPR002130 GO:0000413|GO:0003755
Phco9g02150 300 Gene3D - 122 300 IPR029000 -
Phco9g02150 300 FunFam Peptidyl-prolyl cis-trans isomerase 122 300 - -
Phco9g02150 300 SUPERFAMILY Cyclophilin-like 123 300 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02150 Phco-Chr9 46885593 46894551 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02150 9 46885593 46894551 Phco9g02150 9 46885593 46894551 ECH