Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02108 ATGGCCTCTTCAAATTCACCATGTGCAGCATGCAAGTTCTTGCGTCGCAAATGCCAACCTGAGTGTGCTTTTGCACCATATTTCCCTCCTGACCAACCTCAGAAGTTTGCAAATGTTCATAGAATTTTTGGGGCCAGCAATGTCACCAAGCTTCTCAACGATTTGCACCCTCATCAACGTGAAGATGCTGTGAATTCCCTTGCTTATGAAGCTGAGATGAGACTCCGTGACCCTGTGTATGGCTGTGTTGGAGTGATATCCCTCCTACAGCACCAACTTCGCCAGCTTCAAATGGATCTCTACTGTGCCAAATCTGAGCTCTCTAGGTACCAAAACCTAAGCATCACCACCAATCACAGCCTCATGGCCTCTGAATCCGCCGCAGCCTTCCACCACCACCACCAGAATAACACTGCTAATAGCTTTGGCCGAGACCATCACTATCACTTCCACCACCACCAGTTCTTCCCCAGAGACCAACACCAACAAGTAGCAAGAAGCTTTGATGGAGGCAACAACTACGATGCAAGCCTCTTGGCCATGAACATATCTGCCAGCTTAGGGCAACTCAACCAGCTTCAGCATCAGAGTGCTGCTGGTGGCGGCGATGACCGCCACACTGCCAACCGCTCCTAG 636 0.5031 MASSNSPCAACKFLRRKCQPECAFAPYFPPDQPQKFANVHRIFGASNVTKLLNDLHPHQREDAVNSLAYEAEMRLRDPVYGCVGVISLLQHQLRQLQMDLYCAKSELSRYQNLSITTNHSLMASESAAAFHHHHQNNTANSFGRDHHYHFHHHQFFPRDQHQQVARSFDGGNNYDASLLAMNISASLGQLNQLQHQSAAGGGDDRHTANRS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02108 211 Pfam Lateral organ boundaries (LOB) domain 7 103 IPR004883 -
Phco9g02108 211 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Phco9g02108 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02108 Phco-Chr9 46288233 46288868 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco9g02108 LOB 2.8e-42 No_clan