Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02099 ATGAGGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCTGTTCCTGTTTTAGTTTCTAAAGCTCTAGAACTATTTTTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCATTGCATTTAAAACACTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTCAGCAGAGTTCCTGATTACGGTCATGGCCATGGCCATGGCAATGCTGAGGCTGGTGCTGATGATCGGGCCATTTCAAAAAGAAGGAAAGCTGTCGGTGATGATTGTAATGACAGTGATGAAGAGGCTAAGAGGGGCAAGATGCAAGAGGTGAGCCACACTGGCAGTACTGGTAGTAGGGGAAGAGGCCGAGGTAGAGGAAGAGGTCGTGGCCGAGGGCGACCACCTTTAGTAAGAGACACATATCATCAGGATGCTGAATCTGAGCCTTGCACTTCTGTTCAGCCGAGCAACCAACAAAGTGCAAACCCAAGTGTTGGAGTGGACAGTGGTTCTGAGCCAAAGGATTTACCAAAGGAGGAGAATATTGCAGTTCCTGCTGTAAGCACTGATTCACTCCGGAATATTGATCTGAATGCCGTTACGAATGAAAACGATGACAAAAAGGCTAGTATGGCAGCTGATACCTCATTGCCGGAACCTCCTTCAACAGAGGTTAAGCATGAAGAGATTCTGGGATGGCCCCTTTCTGATGTGGACAAGATGGCCATTGATTCAACACAGCTTGCCCAGCTGGGTAGGCCACTAGAAGAGGAGGAGGAAGATTATGACGAGGAGGAGGGGTAA 876 0.4669 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHGNAEAGADDRAISKRRKAVGDDCNDSDEEAKRGKMQEVSHTGSTGSRGRGRGRGRGRGRGRPPLVRDTYHQDAESEPCTSVQPSNQQSANPSVGVDSGSEPKDLPKEENIAVPAVSTDSLRNIDLNAVTNENDDKKASMAADTSLPEPPSTEVKHEEILGWPLSDVDKMAIDSTQLAQLGRPLEEEEEDYDEEEG 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02099 291 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 126 - -
Phco9g02099 291 MobiDBLite consensus disorder prediction 170 191 - -
Phco9g02099 291 SUPERFAMILY Histone-fold 4 94 IPR009072 GO:0046982
Phco9g02099 291 MobiDBLite consensus disorder prediction 112 213 - -
Phco9g02099 291 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Phco9g02099 291 MobiDBLite consensus disorder prediction 112 132 - -
Phco9g02099 291 FunFam dr1-associated corepressor homolog 1 86 - -
Phco9g02099 291 MobiDBLite consensus disorder prediction 271 291 - -
Phco9g02099 291 MobiDBLite consensus disorder prediction 225 250 - -
Phco9g02099 291 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02099 Phco-Chr9 46213278 46217308 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Phco9g02099 CBFD_NFYB_HMF 2.2e-19 CL0012
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02099 9 46213278 46217308 Phco9g02099 9 46213278 46217308 ECH