Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02061 ATGAGAGAGGAAAACGTTAAGCAGCCATTGTTGAGGAGGAAGAAGAAGTACTACGAGAACTGCCCCGGTTGCAAAGTGGACGAAGCCAAAGAGTTGAGTGAGGGACAAGGTGTACCCATTAAAAATCTTGTTATCATTTGGATATTGGTGGTGTCTAATGCACTGCCTATATCATCTCTCTTTCCGTTCCTTTATTTCATGGTAAGGGATTTTAATATTGCGAAAACAGAAGCTGATATTAGTTATTATGCTGGTTATATCGGTTCTTCATTCATGCTTGGCAGATGTTTGACATCTGTATTATGGGGAGTTGTTGCTGATCGCTATGGTAGAAAGCCTGTAATTGTTATAGGGGTTGTTGTAGTTGTCATTTTCAACACACTATTTGGCCTTAGCACAAGTTTTTGGATGGCTGTTGTTACGAGATTTCTTCTGGGAAGTTTAAATGGTATGCTTGGACCAGTGAAGGCCTATGCCACTGAAATTTTTCGAGAAGAACACCATTCTCTAGGACTCTCAACTGTCAGTGCAGCTTGGGGCACAGGTTTAATCATTGGCCCAGCACTGGGAGGCTATTTGGCTCAGCCAGTAGAGAAGTACCCACATCTATTTCCAAAGGATTCCTTTTGGGATAGGTTTCCATACTTCTTGCCCAACCTTGTAATATCAGTATTAGCATTTATAGTGATTATTTGCTGCTTCTGGGTTCCGGAAACACTTCACAACCACAGTTCTAGCGATGAGTCCATAGACGATGCTGAAGCTTTAGAAGATGGAAACAGTGGAGCTGGCACAGACAAGACAATCCAAAAGAATGAAAACCTCCTCCTGAATTGGCCCTTAATGTCATCTATCATAATTTATTGTGTTTTCTCACTTCATGATATTGCTTATCAAGAGGTTTTCTCATTATGGGCTGTGAGTCCTCGAATGCTGGGGGGTTTGAACTTCTCAACAAATGATGTTGGCAATGTTCTTTCAATAACAGGTGCTGCACTTATCATTTACCAACTTTCGGTCTATCCATCTGTTGAAAGAGCTTGTGGACCTGTTGGAATTGCCCGCATTACAGGGATGTTAACATTACCTCTTTTGCAAAGCTACCCCCTCATAGCATTGTTGTCTGGCGTAGCACTAACCATAGTCATAGTTATTGCTTCAATTCTAAAGAATATTCTGTCCGCCACCATTATAACTGGTTTGTTCCTCCTACAAAACCGAGCAGTGGAACAACACCAAAGAGGGGCAGCTAATGGCATTTCTATGACCTGCATGTCTCTATTCAAAGCTATTGGCCCTGCCACAGGTGGTACAGTATTAACTTGGTCACAGAAGCGGATGGATGCTTCATTCCTCCCAGGTACCAATATGGTGTTCTTTGTTCTGAACATAATTGAAGCAGTTGGAATAATAATGATGTTCAAACCATTCCTTGCTGAGAAGAAGAAAACACACTCAGATCAGTTACACTGA 1473 0.4168 MREENVKQPLLRRKKKYYENCPGCKVDEAKELSEGQGVPIKNLVIIWILVVSNALPISSLFPFLYFMVRDFNIAKTEADISYYAGYIGSSFMLGRCLTSVLWGVVADRYGRKPVIVIGVVVVVIFNTLFGLSTSFWMAVVTRFLLGSLNGMLGPVKAYATEIFREEHHSLGLSTVSAAWGTGLIIGPALGGYLAQPVEKYPHLFPKDSFWDRFPYFLPNLVISVLAFIVIICCFWVPETLHNHSSSDESIDDAEALEDGNSGAGTDKTIQKNENLLLNWPLMSSIIIYCVFSLHDIAYQEVFSLWAVSPRMLGGLNFSTNDVGNVLSITGAALIIYQLSVYPSVERACGPVGIARITGMLTLPLLQSYPLIALLSGVALTIVIVIASILKNILSATIITGLFLLQNRAVEQHQRGAANGISMTCMSLFKAIGPATGGTVLTWSQKRMDASFLPGTNMVFFVLNIIEAVGIIMMFKPFLAEKKKTHSDQLH 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02061 490 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 481 IPR020846 GO:0022857
Phco9g02061 490 CDD MFS_SLC46_TetA_like 46 475 - -
Phco9g02061 490 Gene3D MFS general substrate transporter like domains 40 474 IPR036259 -
Phco9g02061 490 PRINTS Tetracycline resistance protein signature 346 366 IPR001958 GO:0022857
Phco9g02061 490 PRINTS Tetracycline resistance protein signature 115 139 IPR001958 GO:0022857
Phco9g02061 490 PRINTS Tetracycline resistance protein signature 172 194 IPR001958 GO:0022857
Phco9g02061 490 Pfam Major Facilitator Superfamily 46 433 IPR011701 GO:0022857|GO:0055085
Phco9g02061 490 SUPERFAMILY MFS general substrate transporter 41 484 IPR036259 -
Phco9g02061 490 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 37 474 - -
Phco9g02061 490 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 41 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02061 Phco-Chr9 45631013 45636924 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02061 9 45631013 45636924 Phco9g02061 9 45631013 45636924 ECH