Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02058 ATGGAAGAGGAGAATGTTAATCAGCCATTGTTGGAGAAGAAGAAGAAGTACTACGGGAACTGCCCTGGTTGTAAAGTGGAGAAAGACAAAGAGTTGAGTGAGGGGCAAGGTGTACCCTTCACAAAGCTTTTCATCGTGTGGATGCTGGTGCTTTGTGCTGCATTGCCAATATCATCTCTCTTTCCATTCCTTTATTTCATGGTAAGGGATTTTAATATTGCGAAAACAGAAGCTGATATTAGTTCTTATTCTGGTTACGTGGGTTCTGCATTTATGCTTGGCAGATGTTTGACATCTTTGTTTTGGGGAACTATAGCTGATCGCATTGGTCGAAAACCTGTTATAATTATAGGAATTATTTCAGTCATCATTTTCAACACACTATTTGGCCTTAGCACAAGTTTTTGGATGGCTGTTATCGTGAGGTTTCTTATGGGAAGTTTAAATTGTTTGCTTGGACCAGTGAAGGCCTATACCACTGAACTTTTTCGAGAAGAACACCAAGCTCTTGGACTCTCAACCGTAAGTGCAGCTTGGGGCATAGGTTTAATAATTGGCCCATCATTGGGAGGCTATTTGTCTCAGCCAGTAGAAAAGTACCCTCATATATTTCCAAAGGATAGCTTTTGGGATAAGTTTCCATACTCCTTACCCAACTTTGTAATATCAGCACTTGCATTTGTAGTAGCAATTGGCTGCATCTGGATTCCGGAAACACTTCACAACCACAATTGTAGCGATGAATACATAGAAGATGCCAAAGCTTTAGAAAATGGAAACAGTGGGGCTGGCAATGAAAATATTCAGAAAAACGAAAACCTCTTCCTTAATTGGCCCTTAATGTTATCCATCATTGCATATTGCATTTTCTCACTTCATGATATTACTTATCTAGAGGTTTTCTCCTTATGGGCTGTTAGTCCTCAAAGGCTTGGGGGTTTAAACTTTACAACTGATGATGTTGGTAATGTTCTTTCAATATCAGGTCTTGCACTTATCATTTACCAACTTACAATATATTCATCTGTGGAAAAAGCTAGTGGACCTATTTCGCTTGCCCGCATCTCATCTATGTTATCCATACCTCTTTTGCAAAGCTACCCGTTCATAGCATTGTTGTCAGGCTTAGCACTATACATAGTGTTAAGTATTTTTTCAATTCTAAAGAATATTTTGTCTATCACCATTATAACTGGTTTGCTCCTTCTACAAAACCGAGCAGTGGAACAACACCAAAGAGGTGCAGCTAATGGAATTGCTATGACATGCATGTCTCTATTCAATGCTATTGGCCCTGCTACAGGTGGTACATTATTAACTTGGTCACAAAAGAGGATGGATGCTTCATTCCTCCCAGGCACACATATGGTGTTCTTTGTCCTGAACATAGTTCAAGCACTTGGATTACTCACGATGTTCAAACCATTCCTTGTTGAAAAAAAGAAAATGCACACAGATCAGTTACACTGA 1470 0.3939 MEEENVNQPLLEKKKKYYGNCPGCKVEKDKELSEGQGVPFTKLFIVWMLVLCAALPISSLFPFLYFMVRDFNIAKTEADISSYSGYVGSAFMLGRCLTSLFWGTIADRIGRKPVIIIGIISVIIFNTLFGLSTSFWMAVIVRFLMGSLNCLLGPVKAYTTELFREEHQALGLSTVSAAWGIGLIIGPSLGGYLSQPVEKYPHIFPKDSFWDKFPYSLPNFVISALAFVVAIGCIWIPETLHNHNCSDEYIEDAKALENGNSGAGNENIQKNENLFLNWPLMLSIIAYCIFSLHDITYLEVFSLWAVSPQRLGGLNFTTDDVGNVLSISGLALIIYQLTIYSSVEKASGPISLARISSMLSIPLLQSYPFIALLSGLALYIVLSIFSILKNILSITIITGLLLLQNRAVEQHQRGAANGIAMTCMSLFNAIGPATGGTLLTWSQKRMDASFLPGTHMVFFVLNIVQALGLLTMFKPFLVEKKKMHTDQLH 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02058 489 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 41 472 - -
Phco9g02058 489 Gene3D MFS general substrate transporter like domains 41 472 IPR036259 -
Phco9g02058 489 ProSiteProfiles Major facilitator superfamily (MFS) profile. 42 480 IPR020846 GO:0022857
Phco9g02058 489 Pfam Major Facilitator Superfamily 46 432 IPR011701 GO:0022857|GO:0055085
Phco9g02058 489 CDD MFS_SLC46_TetA_like 46 474 - -
Phco9g02058 489 SUPERFAMILY MFS general substrate transporter 43 480 IPR036259 -
Phco9g02058 489 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 37 473 - -
Phco9g02058 489 PRINTS Tetracycline resistance protein signature 115 139 IPR001958 GO:0022857
Phco9g02058 489 PRINTS Tetracycline resistance protein signature 172 194 IPR001958 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02058 Phco-Chr9 45581840 45586925 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02058 9 45581840 45586925 Phco9g02058 9 45581840 45586925 ECH
Phco10g00130 10 1031596 1035854 Phco9g02058 9 45581840 45586925 PCT