Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02042 ATGGTCGGAAACTGCTTGCCGGCGGTGAAGATCACCGGAAGCGGCCGGCCGGTGCTCGAACCGAACGAAATAGAGTGCTTCTTCCTCTCCGGTGTTGATCTTCTCTGCGAAGACGACCCCAGCACTTCCTTCCCCCACCTAAAATCTGGTCTCCTAATCCTCACCACCCACCGCCTCCTCTGGCTCCCGGAATCCAACGCCTCGGGCGGTGGAGCAGCCGGCGGAATCCCCCTGGCCGCGGTCTCACACATTTTCTCCGTCAAGAAGTCCCTTCGCTCGGTGTTCTCCTCGCCGCGGGTCCGGTTCCAGGTGTCGATGTCGCCGGAGGGGCGAGTCGCGGCGGTGGGATCGCAATCGGTGGTGGTGACGGTGGTGGTGAGGGGGAAGGGGGACTGCGACGCGTTTCTGGCCAAGCTTTGGGAGAATTGGCGCGCCAGAGCGTGGGAGGACGCAGGGAGTGGGTCGAGTAATGCGGCGGCGACGGCGGCGGCGGCAGAAACGGCGACGGCATCGTCATCAGGAGGAATTTATTCGAGTGATGGGACGGTGAAGATGGTGGGAGTGTCGGGGATACTTAGAAAAGAGCAGGAAATGTGGGAGAGTACTGATAGAAGCTTGCAGGAGGCTTTTCAGGATTTGAATGCTCTCATGAGCAAGGCTAAAGAGATGGTGATGCTAGCAGAGAAAATGAGGCTAAAACTTTTGTCTGGCTCAAATTCTCAAACCAATGCAACTAATGATGAGGAGATGGGTTCAAAGGAAGAGATGCAAGATTGGTTATTGAGTGTTGGTATTATATCCCCAGTCACCAAAGAGTCTGCGGGTGCTTTGTATCATCAACAACTTTCTCGTCAGTTGGCAGATTTTATTAAAGTTCCACTTGAGAAAGCTGGGGGAATGATCAATCTTATTGATATATATTGTCTATTCAATCGTGCTCGTGGCACAGAATTGATCTCACCTGATGATTTGTTGCAAGCATGTTCTCTGTGGGAGAAGTTTGATGTCCCGGTGGTTCTGCGAAAGTTTGATAGTGGAGTCATGGTAATACAAACTAAGTCTCACAGTGATGAGGAGGTTTTCAATAATGTCAAGATGCTTGTTATGAAACCTGATGCTCTTCGAGCTGGGATAAGTGCTAGCGATGCTGCAAGGACACTAGGGGTTGCCCCAGCAATGGCAAAGGAGCATCTCTTATCTGCTGAGAGCAAAGGTTTACTATGCAGAGATATAAGCCCCGATGGATTTCGCTTCTATATTAACTTGTTCGCTGAAATTTTCCAAGATGATATATATTTAGTAAAAGATCGGGGAATTTTTGGCTCGTGGTTACAGGCTAACCATAATCATGCTTAA 1356 0.5059 MVGNCLPAVKITGSGRPVLEPNEIECFFLSGVDLLCEDDPSTSFPHLKSGLLILTTHRLLWLPESNASGGGAAGGIPLAAVSHIFSVKKSLRSVFSSPRVRFQVSMSPEGRVAAVGSQSVVVTVVVRGKGDCDAFLAKLWENWRARAWEDAGSGSSNAAATAAAAETATASSSGGIYSSDGTVKMVGVSGILRKEQEMWESTDRSLQEAFQDLNALMSKAKEMVMLAEKMRLKLLSGSNSQTNATNDEEMGSKEEMQDWLLSVGIISPVTKESAGALYHQQLSRQLADFIKVPLEKAGGMINLIDIYCLFNRARGTELISPDDLLQACSLWEKFDVPVVLRKFDSGVMVIQTKSHSDEEVFNNVKMLVMKPDALRAGISASDAARTLGVAPAMAKEHLLSAESKGLLCRDISPDGFRFYINLFAEIFQDDIYLVKDRGIFGSWLQANHNHA 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02042 451 ProSiteProfiles GLUE domain profile. 9 155 IPR021648 GO:0032266|GO:0043130
Phco9g02042 451 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 36 8 424 IPR037855 GO:0000814|GO:0032509|GO:0043130
Phco9g02042 451 FunFam Vacuolar protein sorting-associated protein 36 4 146 - -
Phco9g02042 451 Gene3D - 354 425 IPR036388 -
Phco9g02042 451 FunFam Vacuolar protein sorting protein (Vps36) 275 352 - -
Phco9g02042 451 Gene3D - 201 274 - -
Phco9g02042 451 Pfam EAP30/Vps36 family 186 410 IPR040608 -
Phco9g02042 451 Gene3D - 275 352 IPR036388 -
Phco9g02042 451 Gene3D - 9 154 IPR011993 -
Phco9g02042 451 Pfam Vacuolar protein sorting protein 36 Vps36 11 104 IPR021648 GO:0032266|GO:0043130
Phco9g02042 451 SUPERFAMILY PH domain-like 5 133 - -
Phco9g02042 451 FunFam vacuolar protein sorting-associated protein 36-like 354 425 - -
Phco9g02042 451 SUPERFAMILY "Winged helix" DNA-binding domain 314 425 IPR036390 -