Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02032 ATGGGGACTCAAACCATGGGATCTCAAGGTGGTGGTAAAGACAGTAATGGAAAACAGTCACAAGTCCAGCCTCTGGTGCGGCAAAACTCAATGTATAGTCTCACATTGGATGAGGTTCAGAATCAATTGGGCGATTTAGGGAAGCCACTAAGTAGTATGAACCTTGATGAGCTTCTAAAAAATGTGTGGACTGTGGAGGCAGGCCAGACCGTTGGTATGGAGCATGAGGGCACACCACAAGCTGGTCAAGCTGCTCTGCAGCGTCAGGCTAGTCTGTCACTAACTGGTGCACTAAGCAAGAAGACCGTGGATGAGGTTTGGAAAGATATCCAACAAAACAAAATCATTGAGGAGAAGAGGTTCCGAGACAGACAGCCTACTTTGGGAGAAATGACATTGGAGGATTTCTTGGTGAAAGCAGGAGTTGTTGCAGAAACATCTTCTAATCGAAAGAATACTGGTCCTGTTGCTGGGATTGATTCAAACATGGTAGTACCACAGTTTCCTTCACAAGGACAGTGGATACAGTATCCACCTGCACAATATCAGCATCCACAGCAAAGTTTGATGCAGATCTATATGCCCGGCCAGGGTATGGCACAACCAATACACATGGGGCCTGGAGCTTCATTGGATGTTTCGTATGCAGATAGCCAGGTGGTTGCAATGCCATCGCCTCTGATGGGAACAATGTCAGACTCACATACACCTGGAAGAAAAAGGAGCACTCCTGAGGACATGATGGAGAAGACTGTTGAGAGGAGACAGAAAAGGATGATAAAAAATAGAGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAATTGGAGAATAAAGTCTCGCGTCTGGAAGAGGAAAATGAAATGCTGAGGAAACGACAGGAGATAGAGAAGATGTTGCCAAGTACACCACCTCCTGAACCTAAGTATCAACTTCGCCGAATAGGATCAGCTCCATTCTGA 975 0.4605 MGTQTMGSQGGGKDSNGKQSQVQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEAGQTVGMEHEGTPQAGQAALQRQASLSLTGALSKKTVDEVWKDIQQNKIIEEKRFRDRQPTLGEMTLEDFLVKAGVVAETSSNRKNTGPVAGIDSNMVVPQFPSQGQWIQYPPAQYQHPQQSLMQIYMPGQGMAQPIHMGPGASLDVSYADSQVVAMPSPLMGTMSDSHTPGRKRSTPEDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENEMLRKRQEIEKMLPSTPPPEPKYQLRRIGSAPF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02032 324 SUPERFAMILY Leucine zipper domain 254 299 IPR046347 GO:0003700|GO:0006355
Phco9g02032 324 CDD bZIP_plant_BZIP46 254 299 - -
Phco9g02032 324 Gene3D - 252 305 - -
Phco9g02032 324 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 257 272 IPR004827 GO:0003700|GO:0006355
Phco9g02032 324 Coils Coil 270 297 - -
Phco9g02032 324 MobiDBLite consensus disorder prediction 1 26 - -
Phco9g02032 324 MobiDBLite consensus disorder prediction 238 302 - -
Phco9g02032 324 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 252 297 IPR004827 GO:0003700|GO:0006355
Phco9g02032 324 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 323 IPR043452 GO:0003700|GO:0045893
Phco9g02032 324 SMART brlzneu 250 318 IPR004827 GO:0003700|GO:0006355
Phco9g02032 324 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 252 304 - -
Phco9g02032 324 MobiDBLite consensus disorder prediction 225 324 - -
Phco9g02032 324 Pfam bZIP transcription factor 254 298 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02032 Phco-Chr9 45302891 45305766 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco9g02032 bZIP_1 1.1e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g02032 9 45302891 45305766 Phco9g02032 9 45302891 45305766 ECH
Phco10g00121 10 978813 980619 Phco9g02032 9 45302891 45305766 PCT