Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02031 ATGAAATTGAAATCCTTTGCTCACCTTTTCTTTATGTTGTTTTTTGTGGCCTTTTCCAACATCCAAATTTGCCTAGGAGACTGTGATAACCTACAGGATACTTGTCCAGCAGTTCCACCCAATAAGCAGACCATATTCATCAATGGTCTACAATGCAAAAACCCAGTTAATGTAACAGCTCAAGATTTCAGGACCACAAAACTGAGCAATGCTGGCTCTACAGACATTTTTGGTGCATCTATGAACATTGTGAGTGCTGCTGAGTTTGGTGGTCTGAATACTCTTGGCCTCTCCATTGGAAGGACTGATCTTGATGGGAATGGCCTGCTAAACTTCCACTATCATCCTAGAGCTACTGAGATGATCTTTGTTACCAAAGGTGTGTTGTTAGCTGGATTTGTTGATACCAACAACCAGTATTTCCAGAAGTTGATTAAAGTAGGTGATGTGTTTGTGTTCCCCAAGGCTTTGTTCCACTTCTATCTAAATACTGGTTTTGAAGAAGCCACTATCTTCTCAGTGTACAACAGCCAAAATCCTGGTTTTGTATCCCTTAGTCCTACAACTTTTGACACGACATTGGAATCATTAGACAAGATCAAGAGAAAACTCATCTCACTCTCTGCCTCTGAAGCTCAAGATGTAAACAGTTTCATCTCTCAAGAAATGGAAAGCATTTACAGTTAG 687 0.4017 MKLKSFAHLFFMLFFVAFSNIQICLGDCDNLQDTCPAVPPNKQTIFINGLQCKNPVNVTAQDFRTTKLSNAGSTDIFGASMNIVSAAEFGGLNTLGLSIGRTDLDGNGLLNFHYHPRATEMIFVTKGVLLAGFVDTNNQYFQKLIKVGDVFVFPKALFHFYLNTGFEEATIFSVYNSQNPGFVSLSPTTFDTTLESLDKIKRKLISLSASEAQDVNSFISQEMESIYS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02031 228 ProSitePatterns Germin family signature. 108 121 IPR019780 GO:0030145
Phco9g02031 228 PRINTS Germin signature 143 163 IPR001929 GO:0030145
Phco9g02031 228 PRINTS Germin signature 176 191 IPR001929 GO:0030145
Phco9g02031 228 PRINTS Germin signature 113 133 IPR001929 GO:0030145
Phco9g02031 228 Gene3D Jelly Rolls 26 220 IPR014710 -
Phco9g02031 228 Pfam Cupin 78 201 IPR006045 -
Phco9g02031 228 SMART Cupin_1_3 66 191 IPR006045 -
Phco9g02031 228 SUPERFAMILY RmlC-like cupins 47 201 IPR011051 -
Phco9g02031 228 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 25 204 - -
Phco9g02031 228 CDD cupin_OxOx 27 196 IPR001929 GO:0030145
Phco9g02031 228 FunFam germin-like protein subfamily 2 member 1 26 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02031 Phco-Chr9 45287956 45288642 Dispersed/Transposed