Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02022 ATGGCAGTCACCACCACTCTTTCCTTCTTCCACTTTCCATATCCAACGCTCTCTTCTCACTCTCAATTTTCCCTCTCTTCACCTTCTTCGCTCTTCAAACCCTACACTGTTGCTTCCCGCCACAACCTCCGCATCTCCACCACCGCCGCCGTCCTCGCTCTCTCTGCTTTCCCAAACGCAAACTCTCCCACGTTTCTCGCAACGGCTTCTCGGAACACTCAGCCCATGCTCCCTCCTTTCAACGTTTTGATTACTGGCTCAACCAAAGGAATTGGGTATGCATTGGCGAAAGAGTTTTTAAAAGCTGGTGACAACGTCCTGATTTGCTCAAGATCAGATGAAAGGGTAGAGACTGCTGTCCATAGCTTGAGAGTAGAATTTGGGGAGCAGTATGTGTGGGGAACTAAATGTGATGTGAGAAATGCAGATGATGTGAAGAATTTAGTTTCATTTGCTCAAGAAAAACTGAAATACATTGATATATGGATCAACAATGCTGGATCAAATGCATATAGCTATAAGCCACTTGTTGAGGCTTCAGATGAAGATCTTATTGAGGTGGTTACAACAAATACACTTGGCTTGATGATATGTTGTCGAGAGGCAATCAAGATGATGGTGGACCAACCTCGGGGAGGTCATATTTTCAATATTGATGGAGCAGGTTCGGATGGGAGGCCAACTCCTAGGTTTGCTGCATATGGAGCAACAAAGAGAAGTGTGGTGCACTTAACAAAGTCGTTACAGGCTGAACTGCAGATGCAAGATGTTAAAAATGTCCTAGTGCATAATCTTTCGCCAGGAATGGTTACAACAGATCTTCTCATGTCTGGTGTTAATACAAAGCAGGCAAAGTTTTTCATTAATGTCTTGGCAGAACCGGCTGAAGTGGTTGCAGAATACTTAGTTCCAAACATTAGATCCATCCCTGCAAACGGATCAACGAAACCAACATACATTCGATTCCTCACTGGTTTGAAAGCCTATTCCCAGATATTTTCAAGATTCGCATTCGGGGCAAGGAGGAACCGATACATTCTTGAAGATTGA 1050 0.4419 MAVTTTLSFFHFPYPTLSSHSQFSLSSPSSLFKPYTVASRHNLRISTTAAVLALSAFPNANSPTFLATASRNTQPMLPPFNVLITGSTKGIGYALAKEFLKAGDNVLICSRSDERVETAVHSLRVEFGEQYVWGTKCDVRNADDVKNLVSFAQEKLKYIDIWINNAGSNAYSYKPLVEASDEDLIEVVTTNTLGLMICCREAIKMMVDQPRGGHIFNIDGAGSDGRPTPRFAAYGATKRSVVHLTKSLQAELQMQDVKNVLVHNLSPGMVTTDLLMSGVNTKQAKFFINVLAEPAEVVAEYLVPNIRSIPANGSTKPTYIRFLTGLKAYSQIFSRFAFGARRNRYILED 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02022 349 CDD SDR_c 82 303 - -
Phco9g02022 349 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 81 300 IPR036291 -
Phco9g02022 349 PANTHER NON-SPECIFIC LIPID TRANSFER PROTEIN-RELATED 68 346 - -
Phco9g02022 349 Gene3D - 80 307 - -
Phco9g02022 349 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 213 221 IPR002347 -
Phco9g02022 349 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 234 253 IPR002347 -
Phco9g02022 349 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 168 IPR002347 -
Phco9g02022 349 PRINTS Glucose/ribitol dehydrogenase family signature 234 253 IPR002347 -
Phco9g02022 349 PRINTS Glucose/ribitol dehydrogenase family signature 81 98 IPR002347 -
Phco9g02022 349 PRINTS Glucose/ribitol dehydrogenase family signature 157 168 IPR002347 -
Phco9g02022 349 PRINTS Glucose/ribitol dehydrogenase family signature 258 275 IPR002347 -
Phco9g02022 349 PRINTS Glucose/ribitol dehydrogenase family signature 207 223 IPR002347 -
Phco9g02022 349 Pfam short chain dehydrogenase 82 277 IPR002347 -
Phco9g02022 349 FunFam Chlorophyll(Ide) b reductase NOL, chloroplastic 77 322 - -
Phco9g02022 349 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 221 249 IPR020904 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g02022 Phco-Chr9 45173792 45181222 Dispersed/Transposed