Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g02017 ATGATAACGGTGTTTCTCTACAAGCATCATCAGGTTCTACTTATCTGGAAGTTCGTCACCATGGTTGCTGAAGGAACCAAAAAGCCTCAAATTTCATTACCTAAACTAGCGCCACCGCGTACAATCAACGTGCATAAATATGCTGAATCCCGTGCCGTTGAGCTCGAGAGTCTTCAATCTATCATAAAAAATAGAGTAAACAATGATTATACGTCTCGAAGGAACAAGAGGAGAAGAACAACTGCATTTGACAACCAAATTGCAAGGAAAGGGTGCCGAAGAAAGAGGCAGAAACTGGGTATAGTTGGCAGAGCTCTTGCTAAATCAGGTGTGGAGGAGGATCAACTAAAGAAGCTTCCTCGGCGTGTTCGTCGGAGATATGAACTTAAGAACAACCCAGAGAATGGCTTTTGCACTTCTGGGGATGGAACCAAGAGGCTGAGAACTCATGTTTGGCATGCAAAGCGGTTTGCTATGACCAAGATTTGGGGTTACCATCTTCCTTTGTGTCTCCAAGGAAGGGGGAAAGGTTCAAGGTCACTCTTGAAAAGGCTCAAACAAGGGGTGCTTGTACATGATGCAAGCTATTGCACTGCTATCCAATTGGAGGGTCCAGAGGAATCATTAATGTCGGTATTAAGATTGGTACTAGAACCTTCTCCAGCAACAACACATCCTGAAAATCATGACAACTCTGTTCTCTCTGGTGCAACCTATGGAATTGCAATGTTGCATCAAGTTGGAGGTCCCATTTCTCCTCCAATTTCTCCTGTGACCTATATATGGCAACCAACTTCCCAACAAAATATAAGTACACAGCTAGATGAACGAAATCATTATACTTCTTTTGGACAAAATGGTAGTAATGACTCAAACAAACATGATGTTGAATTATGTGAAAAATCATACAAAATGGAGCATGGTTCTTCATATAGACACCTTTGGGTGTGGATACATGCTTCTGCCTTTGAAGAAGGATTTGATAATCTAAAAATTGCCTGTCGGAAAGAGATGGAGAAGAGGGGCATATTAATTAATTGCTTTTCCCTTGAGGGTCAGCTTGCAAAATTAGAATTAATTGGATTAGGGACATTTCAACTTCTTCAAAAGATACTGCATCCTGTTGGAGGTATTTCAGAGAATCATTGGCAATTAAAGAAACACATGGCTATTGAAGAAGAGTGTATTTCTCAGAATGGAAATTCAACCATACTGAAAAATGGAGAACATTTTTCTTCTTGTGCTATGTTACCTCTTAATGTTAAGGATCCTCGAGAATTGCAATGGAAGAGGAATGTTGTTCCAGTGGAGCCCATTTCAACTAGGACTTTGAGTGATGCATCGGAAACGAAATACAAAGAGCTTGCTGAACTGCGAGGAATTTTGGAAGAGAATAAAGACTCATCTCCATTATCAGGGTCAAAACTTGAAGATAGCCAGTCTAATATTGATGATCTATGGTATGCTACCACTAGAGGACTGAGGCCCCCAGTAGAAGACAGTGTCCTTTCCAAGGAGAAACACCATGAACGAATGGTTAATTTCTGCCTTGATGATATAGATTCTGGAGAGGCCAACTCTTCAACCAAGGTGCAGTGCTCGAGATCTTGCCCTATTCTTCTTTTAAAAAATGATATGAAGGAATTGAGCATAGGATGGTCCGTTATACTTCCCTTAAGTTGGGTCAAAGCTTTCTGGATTCCGCTCATCTCCAATGGGGCACATGCAATAGGTTTGCAAGAGAAGCACTGGATTACATGTGAAATGGGGCTACCACTTTTCCCTTCAGATTTTCCAGATTGTAAGGCATACTCTTGCTTAATGGAATATAAAGATGCTGCCTTTAATAAAAAGGAAGAACTTCGTCCTCCATCCATAAGGCATTTGAGAGTTCCCATCCAACCTCCATGGGGTATTGTTCGCATTACCTTTGAAAAAATGATTAGTGCAATGGAGACTCCTAATCTTTCAACTAGGGAAGATTTTACCAACACTAATTCATTACCAAACCCTTGCCCTGGTAGCTTTAAAATCTCAAACTCTGACTCTTGGGGTAATTCGTTTGATGGAGCTGTAGTTAGGACTGGTTCTATGCTGACCACTTTCCTCCATGAAACCAAAGTTGGTCAGTTGTTATTGTTTCCTTATGCAGCAGATGGAGAGGCTAGAATCTCCAAGTTTATTAATGGAGAGCTAAAGCTTGATCCAAGGTATAAAAGCTCTGACATATATGACCATAAGCCATGTTTTCTAAGAGTTCATCTTCATCCATTCAAGGAAGGATGCTTTGAAGAGGGTGCAGTTATTTGTGCACCACATACTTCTGATATATTTTTATGGACTTCAAGTTCAGAGAGAAGTGAAGAGGGACTTCAAATGTCTCAGTCTGCTATGCGATTATACTTCAAAGAACATTCCTCTGGTAGATGGGAAATGCAGATACCAGATGATGCAATTTCTAGCAAATCTCACCGGTGGCCTATTGGCTTTGTCACAACAGCTTCTGTTCAAGGAAGCAAGAGTCTTGTAGCTGAGGGCTTTTGCGAGGCTGTTTTACTATCTCATTTAAGAGAAGAACAGTGGAAGGAGATGCCTATGAAACAGAGAAGGAGGGAAATATACGTACTTGTCAGGAATTTGAGATCTACAGCATATAGACTTGCTCTTGCCTCTATCGTTCTTGAGTATAAGGAAAATGACATTGGATTCTTGTAA 2715 0.4074 MITVFLYKHHQVLLIWKFVTMVAEGTKKPQISLPKLAPPRTINVHKYAESRAVELESLQSIIKNRVNNDYTSRRNKRRRTTAFDNQIARKGCRRKRQKLGIVGRALAKSGVEEDQLKKLPRRVRRRYELKNNPENGFCTSGDGTKRLRTHVWHAKRFAMTKIWGYHLPLCLQGRGKGSRSLLKRLKQGVLVHDASYCTAIQLEGPEESLMSVLRLVLEPSPATTHPENHDNSVLSGATYGIAMLHQVGGPISPPISPVTYIWQPTSQQNISTQLDERNHYTSFGQNGSNDSNKHDVELCEKSYKMEHGSSYRHLWVWIHASAFEEGFDNLKIACRKEMEKRGILINCFSLEGQLAKLELIGLGTFQLLQKILHPVGGISENHWQLKKHMAIEEECISQNGNSTILKNGEHFSSCAMLPLNVKDPRELQWKRNVVPVEPISTRTLSDASETKYKELAELRGILEENKDSSPLSGSKLEDSQSNIDDLWYATTRGLRPPVEDSVLSKEKHHERMVNFCLDDIDSGEANSSTKVQCSRSCPILLLKNDMKELSIGWSVILPLSWVKAFWIPLISNGAHAIGLQEKHWITCEMGLPLFPSDFPDCKAYSCLMEYKDAAFNKKEELRPPSIRHLRVPIQPPWGIVRITFEKMISAMETPNLSTREDFTNTNSLPNPCPGSFKISNSDSWGNSFDGAVVRTGSMLTTFLHETKVGQLLLFPYAADGEARISKFINGELKLDPRYKSSDIYDHKPCFLRVHLHPFKEGCFEEGAVICAPHTSDIFLWTSSSERSEEGLQMSQSAMRLYFKEHSSGRWEMQIPDDAISSKSHRWPIGFVTTASVQGSKSLVAEGFCEAVLLSHLREEQWKEMPMKQRRREIYVLVRNLRSTAYRLALASIVLEYKENDIGFL 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g02017 904 Pfam Ribonucleases P/MRP protein subunit POP1 70 204 IPR009723 -
Phco9g02017 904 ProSitePatterns Neurotransmitter-gated ion-channels signature. 587 601 IPR018000 -
Phco9g02017 904 Pfam POPLD (NUC188) domain 552 627 IPR012590 -
Phco9g02017 904 PANTHER RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 27 892 IPR039182 GO:0000172|GO:0001682|GO:0005655