Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01988 ATGGACGTAGCACATTGGTATTTAAAGGGGAATGCTGATGCTGTGGAGTTTTGTCCGTATGATTTGTACCTTAACGTTTTAGCGGTATCCACTTACACATTACAAGAAGGTTCTCAGCCCAGTCGACATGGAACCATTTCACTCTTCAATGTTGATGTGGACACACCCCACCTTCACCTGCTTTTTAGTGAGGAAACTGCTGCCATTTTTGATATCAAGTGGAGCCCACCTCGAGGGCATGTCAATCCTCTTCTAGCTCAAGCAGATGCTGATGGATACTTGAGAATTAAAATGCTGGAAGGTTGCTGTAATGGAGTGGAAGGGGTTAATCTAAAGGAGATGAGTAATGAAAAAATGAGTAACTCTATGTGCCTGTACCTGGATTGGAACCCTTCAGCCACGTCTATCACAGTAGGACTTTCTGATGGCTCTGTGTCTATTGTTTCTGTTCTTGAATCCAAGCTGGAAATACAACAAGAGTGGAAGGCACATGATTTTGAAGTTTGGACAACCTCCTTTGATACCCACCAACCAAATTTGGTATACACTGGCTCTGATGATTGTAAGTTCAGTTGTTGGGATTTGCGAGATAGACCTCCCAATGTGGTATTTCAGAGCTCTAAAGTCCACAAAATGGGTGTTACTTGCATTGAGAAGAGTCCACATGACCCAAATATCTTGTTGACTGGAAGCTATGATGAATTCCTGAGGGTATGGGATTTAAGATCAATCTCAAAACCCCTTAACAAGACTTCAATTAGCTTAGGGGGAGGAGTTTGGAGAGTTAAGCACCACCCCTTCATTCCAGGCTTGGTCTTGGCTGCATGTATGCACAATGGTTTTGCTATTGTTGCTATTAAAGGTGACGATGCTCAAGTATTGGAAACTTACAACAAACACGATTCTCTTGCTTATGGAGCAGACTGGCAGAAAGGAGAAGCAAATCACAAACCACTTGTGGCTACTTGCTCATTCTATGACAAACATCTTCGGGTGTGGAGGTCAGCAAATGATATTATCTTGTAG 1026 0.4269 MDVAHWYLKGNADAVEFCPYDLYLNVLAVSTYTLQEGSQPSRHGTISLFNVDVDTPHLHLLFSEETAAIFDIKWSPPRGHVNPLLAQADADGYLRIKMLEGCCNGVEGVNLKEMSNEKMSNSMCLYLDWNPSATSITVGLSDGSVSIVSVLESKLEIQQEWKAHDFEVWTTSFDTHQPNLVYTGSDDCKFSCWDLRDRPPNVVFQSSKVHKMGVTCIEKSPHDPNILLTGSYDEFLRVWDLRSISKPLNKTSISLGGGVWRVKHHPFIPGLVLAACMHNGFAIVAIKGDDAQVLETYNKHDSLAYGADWQKGEANHKPLVATCSFYDKHLRVWRSANDIIL 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01988 341 SUPERFAMILY WD40 repeat-like 40 334 IPR036322 GO:0005515
Phco9g01988 341 PANTHER DIPHTHINE METHYLTRANSFERASE 9 337 - -
Phco9g01988 341 Pfam WD domain, G-beta repeat 209 240 IPR001680 GO:0005515
Phco9g01988 341 SMART WD40_4 290 334 IPR001680 GO:0005515
Phco9g01988 341 SMART WD40_4 154 194 IPR001680 GO:0005515
Phco9g01988 341 SMART WD40_4 110 149 IPR001680 GO:0005515
Phco9g01988 341 SMART WD40_4 200 240 IPR001680 GO:0005515
Phco9g01988 341 ProSiteProfiles Trp-Asp (WD) repeats profile. 207 243 IPR001680 GO:0005515
Phco9g01988 341 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 207 243 - -
Phco9g01988 341 Gene3D - 9 334 IPR015943 GO:0005515
Phco9g01988 341 ProSitePatterns Trp-Asp (WD) repeats signature. 227 241 IPR019775 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01988 Phco-Chr9 44859894 44861045 Proximal