Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01986 ATGCCATTTTGCCGTGGCCAAAAGTTTTTCAAGAGGTTCTGCGTTGATGAATTCCAAATGGCAAGTCTTCCATATAGCAGCTTTCTGTCTAATGATCTCTTGCCATCCCTTGGAGCCAGAATCAACCAAGAAACAAGGCTTAGAAGATGCACAGTTTCCCCTTTTGATCCACGTTACAGGGCTTGGGAGATGCTACTGATTGTCCTTGTTGTTTACTCTGCATGGATATGCCCCTTTGAGTTTGCCTTTCTCCCTGAAAAGCAAGACACACTGTTCATCATAGACAACATTGTCAATGCCTTCTTTGCAATTGACATCATTCTCACATTCTTTGTTGCATATCTTGATCACCATTCCTACCTTCTTGTTGATGATCCAAAGAAAATTGCATTAAGGTACATATCTACCTGGTTTGTCTTTGATATCTGTTCAACTGCACCATTTCAATCCATCAGCCTCCTATTCACTGATCACAGCAGTGAAATTGGGTTCAAAATTCTGAACATGCTTCGGTTGTGGCGCCTGAGACGTGTCAGTTCTCTGTTTGCAAGACTTGAGAAGGACATTCGCTTCAATTACTTCTGGACCAGGTGCTCCAAGCTCATTGCTGTGACATTGTTTGTTGTGCACTGCGCTGGATGCTTCAACTATCTGATTGCAGATAGGTACCCAGATGCTAAATCAACATGGATTGGTTCTGTGTATCCAAATTTCAAAGAAATGAGTCTCTGGGACAGATATGTCACTGCCATTTATTGGTCCATTGTCACTCTTACTACCACTGGCTATGGAGATTTGCATGCTGAAAACCCAAGGGAGATGCTCTTTTTCATCTTCTACATGTTGTTCAACTTGGGATTAACTTCATACATCATTGGAAACATGACAAACATAGTAGTTCATTGGACAAGCCGCACCAGAAATTTTAGGGATACAGTGAGAGCAGCTTCAGAATTTGCCTCAAGAAACCATCTCCCACATCACATACAGGAACAGATGTTGTCACACTTGTGTTTGAAGTTCAAGACAGAAGGACTGAAGCAGCAAGAGACCGTGAATGGCATGCCAAAGGCAATTCGTGCAAGCATTGCACACCATCTATTTTTCCCTGTTCTGAAGAGGCTCTACCTCTTCCAAGGAGTTTCAGATGATTTTCTCTTCCAACTGGTTATAGAGATGGAAGATGAGTATTTCCCACCAAAGGAAGATGTGATACTACAAAATGAGTCTCCCACAGACCTCTACATACTGCTTTCAGGAGCAGTGCTACTGAACCTGATAGATCATGTTATTGAATTTCAGGTTCTAAAGAAGGCTAAGGCAGAGGACACATTTGGAGAGATTGGAGTGTTGTACTGTAGACCACAGCCTTTCACTGTTCGGACCACTGAGCTTTCTCATATTTTAAGACTCAGCAGAACTTCCTTAATGAACTACTTACATGCATATCCACAAGCTGCACAAATCATAATGAAGAATATCTTCATGAAGTTAAAGGGGCATGAAGGCTTGGATTTTGAATATTCACCAAGAGAACCCCAAATGCATCATGATATGGATAACACAGAAGGAAGTTTTCCTGATTCATCTGCAAATAATTCTCATGGGGAAATGCATAACTTGGTTCCTGAGGATGGAAAAGGAGATCTTCATGCTACTTTTCACAAAGATCATCCTGAAATGGAAGAAAATGAAAAGAGCCAAGGCCCTATAAGATGGAAACAGAAGTCTCTTGTAGATCAGCAACAAAACAAGAGCCGTTCTGACCTTGCAATTAACCATGAAAATAGGAAGATAGTAGATGAACATATCATAGAGTTTTTGGAACCAGAAATCCCTTTCAACTACCCTTTAGGAAAAATATACTCAAACTCTTATTCAAGTACTTCTAACCACAGAACTCAAAGAGAAACAGAAAGATTCTTCAAAAAGAGAGTTACCATCCACTTTCTAAGCAAACACAAAACTACCTTACAGGAAAATGGGAAGTTGATAATCCTACCTGATTCATTAGAAGAGCTGCTCCATATTGCTGGAGAAAAATTTGGAGGGCCCAAGCCTACAAAGGTAATCACCGCAGATAATGCAGAGATAGATGATATTAGTGTGATTCGAGATGAGGATCATCTATTTTTTCTTTGCAGTGACACTGAAAGTTGA 2160 0.4056 MPFCRGQKFFKRFCVDEFQMASLPYSSFLSNDLLPSLGARINQETRLRRCTVSPFDPRYRAWEMLLIVLVVYSAWICPFEFAFLPEKQDTLFIIDNIVNAFFAIDIILTFFVAYLDHHSYLLVDDPKKIALRYISTWFVFDICSTAPFQSISLLFTDHSSEIGFKILNMLRLWRLRRVSSLFARLEKDIRFNYFWTRCSKLIAVTLFVVHCAGCFNYLIADRYPDAKSTWIGSVYPNFKEMSLWDRYVTAIYWSIVTLTTTGYGDLHAENPREMLFFIFYMLFNLGLTSYIIGNMTNIVVHWTSRTRNFRDTVRAASEFASRNHLPHHIQEQMLSHLCLKFKTEGLKQQETVNGMPKAIRASIAHHLFFPVLKRLYLFQGVSDDFLFQLVIEMEDEYFPPKEDVILQNESPTDLYILLSGAVLLNLIDHVIEFQVLKKAKAEDTFGEIGVLYCRPQPFTVRTTELSHILRLSRTSLMNYLHAYPQAAQIIMKNIFMKLKGHEGLDFEYSPREPQMHHDMDNTEGSFPDSSANNSHGEMHNLVPEDGKGDLHATFHKDHPEMEENEKSQGPIRWKQKSLVDQQQNKSRSDLAINHENRKIVDEHIIEFLEPEIPFNYPLGKIYSNSYSSTSNHRTQRETERFFKKRVTIHFLSKHKTTLQENGKLIILPDSLEELLHIAGEKFGGPKPTKVITADNAEIDDISVIRDEDHLFFLCSDTES 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01986 719 MobiDBLite consensus disorder prediction 511 586 - -
Phco9g01986 719 SMART cnmp_10 377 495 IPR000595 -
Phco9g01986 719 Gene3D - 60 300 - -
Phco9g01986 719 ProSiteProfiles cAMP/cGMP binding motif profile. 377 497 IPR000595 -
Phco9g01986 719 Pfam Cyclic nucleotide-binding domain 397 481 IPR000595 -
Phco9g01986 719 SUPERFAMILY Voltage-gated potassium channels 54 299 - -
Phco9g01986 719 SUPERFAMILY cAMP-binding domain-like 304 494 IPR018490 -
Phco9g01986 719 Gene3D Jelly Rolls 344 507 IPR014710 -
Phco9g01986 719 FunFam Potassium channel KAT2 365 502 - -
Phco9g01986 719 MobiDBLite consensus disorder prediction 540 570 - -
Phco9g01986 719 Pfam Ion transport protein 60 306 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phco9g01986 719 ProSiteProfiles KHA domain profile. 645 719 IPR021789 -
Phco9g01986 719 PANTHER POTASSIUM CHANNEL AKT1 26 502 IPR045319 GO:0005249|GO:0006813
Phco9g01986 719 Pfam KHA, dimerisation domain of potassium ion channel 644 712 IPR021789 -
Phco9g01986 719 CDD CAP_ED 377 491 IPR000595 -
Phco9g01986 719 PRINTS EAG/ELK/ERG potassium channel family signature 106 115 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco9g01986 719 PRINTS EAG/ELK/ERG potassium channel family signature 95 105 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco9g01986 719 PRINTS EAG/ELK/ERG potassium channel family signature 273 284 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco9g01986 719 PRINTS EAG/ELK/ERG potassium channel family signature 247 264 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco9g01986 719 PRINTS EAG/ELK/ERG potassium channel family signature 72 79 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco9g01986 719 PRINTS EAG/ELK/ERG potassium channel family signature 291 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco9g01986 719 FunFam Potassium channel KAT3 61 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01986 Phco-Chr9 44820173 44826454 Dispersed/Transposed