Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01977 ATGTGCAGCTCCAAGACCAAAGTGACCGTAGGCATAGAAGCCACAGCCACAACCACATATCCTGTGGCCAGAATCAATGGCAGGCCAGTTCTTCAACCTACTTGTAACCGAGTTCCTAACCTTGAGAGGAGAAATTCAATCAAGAAAGTGTCACCAACATCACCTTCTCCACCATCACCACCACTTCCAATCAAGACCTCATTGACACCTCCTGTTTCTCCAAAGACTAAGTCCCCTAGGCCTCCACCTATGAAGAGAGGTAATGATAGTAATGGACTAAACTCAAGTTCTGAAAAGATTGTGACCCCAAGACACGCCATCAAAACTCCAACTCTAGAGAGGAAAAAGTCTAAGAGTTTTAAGGAAGGATCCTGTGGCACTTTAGTTTCTCCTGCCTCCATAGAGGCATCATTAAGCTACTCTTCCACTCTGATCACTGAATCCCCAGGGAGCATAGCTGCAGTGAGGAGGGAACAGATGGCACTGCAGCATGCACAGAGAAAAATGAAGATCGCCCATTATGGAAGATCAAAGTCTGCAAAGTTTGAAAAAGTTGTTCCTCTTGATCTTTCAACCAATCTTACATCAAAGACAGGTGAGGAGGAGAAGAGATGCAGCTTTATCACAGCTAGTTCAGATCCCGTCTATATTGCTTATCATGATGAAGAATGGGGAGTTCCAGTTCATGATGACAAGATGTTGTTTGAACTTCTAGTTTTAAGTGGTGCACAGGTTGGATCAGATTGGACCTCAATCTTGAAGAAACGCCAGGATTTCAGGACTGCATTTTCAGAATTTGATGCAGCAACCTTGGCCAACATGACTGATAAGCAAATGGTATCTACTAGTTTGGAATATGGAATTGATATAAGCAGAGTTCGAGGTGTTGTTGACAATGCTAACAGAATTTTAGAGATTAACAAGGACTTTGGTTCATTTGACAAGTACATTTGGGGTTTTGTCAATCACAAACCCATCTCCACGCAACACAAATTTGGCCACAAGATCCCAGTGAAGACATCAAAGTCAGATAGCATAAGCAAAGACATGATCAGGAGAGGCTTTAGGTTTGTAGGTCCAACAGTGCTTCACTCATTTATGCAAGCAGCTGGACTCACCAATGACCACTTAATCACTTGCCATAGACACTTGCAATGCACCAGAGAGTCCTCCCTATAG 1179 0.4334 MCSSKTKVTVGIEATATTTYPVARINGRPVLQPTCNRVPNLERRNSIKKVSPTSPSPPSPPLPIKTSLTPPVSPKTKSPRPPPMKRGNDSNGLNSSSEKIVTPRHAIKTPTLERKKSKSFKEGSCGTLVSPASIEASLSYSSTLITESPGSIAAVRREQMALQHAQRKMKIAHYGRSKSAKFEKVVPLDLSTNLTSKTGEEEKRCSFITASSDPVYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDFRTAFSEFDAATLANMTDKQMVSTSLEYGIDISRVRGVVDNANRILEINKDFGSFDKYIWGFVNHKPISTQHKFGHKIPVKTSKSDSISKDMIRRGFRFVGPTVLHSFMQAAGLTNDHLITCHRHLQCTRESSL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01977 392 SUPERFAMILY DNA-glycosylase 203 386 IPR011257 GO:0003824|GO:0006281
Phco9g01977 392 Pfam Methyladenine glycosylase 211 383 IPR005019 GO:0006284|GO:0008725
Phco9g01977 392 PANTHER OS04G0501200 PROTEIN 22 388 - -
Phco9g01977 392 Gene3D Hypothetical protein; domain 2 202 384 - -
Phco9g01977 392 MobiDBLite consensus disorder prediction 30 126 - -
Phco9g01977 392 MobiDBLite consensus disorder prediction 38 52 - -
Phco9g01977 392 MobiDBLite consensus disorder prediction 53 81 - -
Phco9g01977 392 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01977 Phco-Chr9 44670605 44673049 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01977 9 44670605 44673049 Phco9g01977 9 44670605 44673049 ECH
Phco10g00476 10 4586985 4589082 Phco9g01977 9 44670605 44673049 PCT