Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01970 ATGAAGATTGACAAATGGTGGACAACAAAGGTGGATAAACGGAAGATGAAAGAAAGACTAGCTCTGCTTCAACCGCCGTACGCCCTCGGCGGCGCGACAGTTATCCTCCGCTGCTTCAGCCGCCGCTGCCCTCGGCGGCGCGACTGTTATCCTCCGCGAGGAAGTCCTTCCTATTCGCAACTCGAAGAGCCTCCCCAAGACGCAGAGCTTCTTTTCCTCTCCGTGACCGTGAGAGCAAGATTTTTCGTTAGAGGTGGGCTGGGTTGGGCCAGTCCATTGAGGAGGTGGACCAAAGTGGGCTGGGTCAAACAGGCTGGGCTGGCCTGTCTTGACAGCCCTATTCGTAACCAGTTGTTCAGAAAGGTTTTTTGTTTAGGCAGGAATTTTCAAAGGCATGTCTGCTTTGAGCAGTTCAATCCATTTCTGCAAAAATTTTCCACTTCTGGCAATTGTGAAAGATTATCATGGGAACGTTCCACCAAAGAAATTCTATTGGGAAAGATTAAGTTTGCTTTAAGGAATTATCAGGTGCATGAAGCATGGGAATCCTTTCAGGATTTTAGAAGACTTTATGGTTACCCTGAGGTTCATCTAGTGAACCAGCTCATTGTTCAATTGTCCTATTCTTCCAATCATGTTTGGATGCGAAAAGTTTGTAATTTGGTGTTGCAGATTGTCCAAGAGAAGTCAGGTTTACTTCATGCTGATACCTTAACCAAACTTGCACTCTCCCTTTCTAGGTTGCAAATGCCATCCCCTGCCTCAGTGATACTTAGGTTGATGCTTGACAAAGGGTGTGTGCCCTCTATGCATTTATTGTCCTTGGTTGTTTTTCATATTGTGAAGACAGAAATTGGAACACATCTTTCATCCAATTATCTGTTCCAAGTTTGTGATCTTTACAATTGCTTGAAAGATAAGAAGGATCACCATGCAGTCACGATCAAGCTGGACACCTTGGTCTTTAATCTTGTTCTTGATGCTTGTGTGAAGTTTAAATTGTCTTTGAAAGGCCTGAGACTGATTGAATTAATGTCGCTGACTGGGACCATGGCTGATGCACACTCGATTGTGATAATTTCACAGATTCTAGAGATGAATGGTCTGAGAGATGAAATGCAGGAATTGAAGGATCATATTGACAGAGTTTCGGCTGCTTATGTTTGTCACTATTGTCAGTTCTATGATAGTTTGCTGAGCTTGCACTTCAAATTTAATGACATTGATGCTGCAGCTAAGCTTGTTCTGGATATGACTAGCTCGCATAATTGTATTGATAAGAAAGAATATGGGAAACACGTGCAAAATCCTTGTTTTATTGCCATTGGATCTCCTAACCTTAGGACTGCATTGAAGATACGCATTGAGCCTGAGGTAATGTGTAAGGATTATGTCCTTAAAGTTGAAAGCAGACAGGTTCTTATCTTTTATAGGGGTGGGAAACTAGTTCTTAGTAATAGAGCTTTGGCTAAGTTCATCAGTGGTTACAAGAGAGATGGAAGGACTGGTGAACTTTCAAAACTTTTACTTAGTATTCAAGGGGAATTATGTTCAGTGGCAGGCTCCAGTTTGTGTTTTGATGTGATCAGTTCTTGTATTCAATTAGGATGGCTTGAGTGTGCTCATGACATTTTGGATGATATAGAGGCTACTGGTTCTCCAATGGGTCAGGATATGTATCTATTACTTGTGTCAGCATACCAGAAGCGGGGAATGAAAAGAGAAGCAAAGGCACTACTGAAACAAATGAAAAAGGTTGGTCTGTTGGACAAAGGGTTATCCGATGATGCTATGGACAAACACAACCTCTGTGAAGAGACATTAAATTCACTTGGTAAAACAGATTTGGCTATTGCTTTAGCTCAAATATTGAAAGATGAAGATCAGACAGTTTTTCCTTTGGTGTATAACTTCAATTCTTCCATTTTCTTTTTCTGCAAGGCCAGAATGATAGAGGATGCATTAAAGGCATATAGAAGAATGGTTAGCTTGAAAGTTCAGCCCACAAGTGAAACTTTTGCCTTTTTGATGTGTGGATATTCTTCTCTTGGTATGTATCGTGAGATCACAATCTTGTGGGGAGACATTAAGAGATTCATGAAGAGTGACAATTTAGTGGGAAATAGAGATCTCTATGAGTTACTATTGCTAAACTTTCTTCAAGGTGGTTACTTTGAGAGAGTGATGGAGGTCATTAGCCATATGAGAGACCATAACATGTATGCTGACAAGTGGATTTACAAAAGTGAGTTCCTTAGACTTCATAAGAATCTTTATAGGAGTTTAAAAGCATCAAATACAAGAACAGAAGCACAAAGCAAACGACTTGAGCATGTTCAGGAGTTTAGGAAATGGGTGGGTATTGATTAA 2370 0.4097 MKIDKWWTTKVDKRKMKERLALLQPPYALGGATVILRCFSRRCPRRRDCYPPRGSPSYSQLEEPPQDAELLFLSVTVRARFFVRGGLGWASPLRRWTKVGWVKQAGLACLDSPIRNQLFRKVFCLGRNFQRHVCFEQFNPFLQKFSTSGNCERLSWERSTKEILLGKIKFALRNYQVHEAWESFQDFRRLYGYPEVHLVNQLIVQLSYSSNHVWMRKVCNLVLQIVQEKSGLLHADTLTKLALSLSRLQMPSPASVILRLMLDKGCVPSMHLLSLVVFHIVKTEIGTHLSSNYLFQVCDLYNCLKDKKDHHAVTIKLDTLVFNLVLDACVKFKLSLKGLRLIELMSLTGTMADAHSIVIISQILEMNGLRDEMQELKDHIDRVSAAYVCHYCQFYDSLLSLHFKFNDIDAAAKLVLDMTSSHNCIDKKEYGKHVQNPCFIAIGSPNLRTALKIRIEPEVMCKDYVLKVESRQVLIFYRGGKLVLSNRALAKFISGYKRDGRTGELSKLLLSIQGELCSVAGSSLCFDVISSCIQLGWLECAHDILDDIEATGSPMGQDMYLLLVSAYQKRGMKREAKALLKQMKKVGLLDKGLSDDAMDKHNLCEETLNSLGKTDLAIALAQILKDEDQTVFPLVYNFNSSIFFFCKARMIEDALKAYRRMVSLKVQPTSETFAFLMCGYSSLGMYREITILWGDIKRFMKSDNLVGNRDLYELLLLNFLQGGYFERVMEVISHMRDHNMYADKWIYKSEFLRLHKNLYRSLKASNTRTEAQSKRLEHVQEFRKWVGID 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01970 789 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 634 668 IPR002885 -
Phco9g01970 789 NCBIfam pentatricopeptide repeat 645 669 IPR002885 -
Phco9g01970 789 Gene3D Tetratricopeptide repeat domain 529 788 IPR011990 GO:0005515
Phco9g01970 789 Pfam PPR repeat 644 664 IPR002885 -
Phco9g01970 789 Pfam PPR repeat 559 587 IPR002885 -
Phco9g01970 789 Gene3D Tetratricopeptide repeat domain 286 441 IPR011990 GO:0005515
Phco9g01970 789 PANTHER BNAC05G43320D PROTEIN 129 788 - -
Phco9g01970 789 Coils Coil 366 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01970 Phco-Chr9 44578986 44583471 Dispersed