Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01967 ATGCCTGCTTATGGGGCATCATTTGACCTAAACTGGCTTCTTGGGTTGCTTGGTTTGGGAGAAAAGGGAGCACCCATTTCTGATAATAATAACATCAAGACTTGGCTTCAGATATTGTTGCTCACACTTGTGATTGGAATCTTGTTTCTGTTGTATCAGTTGGCAGATGACAGAGAAAACAATCACAATGTCAATGAGGTTGATGAGTTGGAGGAGATGGATCATCCCAGTCATGAGCTGGACCATTTTTATGAGTCTCTGCATAGAGAGCAGGAGCACCCCAATGGTGATTTAGACCATTACTTTGATGAGGATGATTCTCACCGGGCCACCGTGCCTGGTGGCAATGATGGGAGGAGACACGGTGGCTGTGCCTTCTGTGGAAATTTCAGCACCACAAGGTGCTCTCGCTGCAAGGCTGCTAGATATTGCTCTATGAAATGCCAAATTATGCATTGGAGATCAAGGCATAAATATGAATGCTGTGAATCAGAAATTGCAGCAGATAAAGCAAAAAGAACTGAGAATGAAAGAACCTCGAAGCCTGTTGAGAATTCTGAAATGGAGAGTTCCCATGTTGAAGATGGAGCATTGTGGAGTTCAGAATCAGACATGGTAATGGAAGTTTCGAGTAGTAAAAATGTTAAGAATTTGCATGGTTGTAAATTATGTGGAAACCCAAGTACTACAAGATGTCCACGATGCAAAGCCGTCCAATACTGTTCAATGAAGTGCTTGATTATGGACTGGAAATGGCATAAAGTGGACTGCATTGCAAGGGTGGATTCAACTCCAAACGAAAGATCAAGAGATGTTGGAATGCTTCAGAATTCATACGAAGAGGAAGATAATGTTCAATCATCTGGTCCCCTTTCTTTGGAGTGTAATCCAGCAGGAAACACAAGCCTCAAGTCTCCAATTGAAGTATCACAGGGTCCTACCAACAAAGTGTTATTATATCTTATGGATGAAGTAGCAAAGTCTAGGAAAGAGACTTTATCATTACAATCAAAACTTGATGAGTGGAAGAATCTAGCAAATTTTGAGAGAGAAAAATTTCAAAGCATCAAAAGACAATCAAACTACCAGTTGCTTGTGTTGAAGAAGGAAAAAGAATCAATATCAGATGATGAAAAGAAAGCTTACCATGTAATTCATAGTTTACACAAAAGGCTAAACCACTTGCAGAATTCAGTGCAAGAAAGCAATGCAGAGAAGAGAAAGCTAGAAGAACATGTACAATGTTTAGAGAGTGAATGTGCTGACTTGAAGAAAGTATTGCAAGAAAAGCATAAACGTGCTCAACGTCTTACAATGGAATGTGGCAAGAGTCAAGAGGCTGCAAAAATGGCAATGAGAGAAGTTGAAGTAGTGAGACAGGAGATACAAGAAAAGAGAGAGCATGCCCAACATCTCAAGGAGAATTTTCGAAGAGATCTTATATTTGCTGAATCTAGAGCTGCAATTGCCGAGGAAAAACTAAGTGATCTTTACAGGAAAATCAAAATATCAGATTATAAGCTTTGTTCTATATGCCTCTCCAATGATAATGACTTGGCCTTTGGATGTGGACACATGACTTGCAGAGACTGTGGATCAAAATTATCAAGGTGTCCTATATGCCGGGAGCTGATCACAAACCATATCAGGCTATTTCCTGGTTGA 1665 0.4024 MPAYGASFDLNWLLGLLGLGEKGAPISDNNNIKTWLQILLLTLVIGILFLLYQLADDRENNHNVNEVDELEEMDHPSHELDHFYESLHREQEHPNGDLDHYFDEDDSHRATVPGGNDGRRHGGCAFCGNFSTTRCSRCKAARYCSMKCQIMHWRSRHKYECCESEIAADKAKRTENERTSKPVENSEMESSHVEDGALWSSESDMVMEVSSSKNVKNLHGCKLCGNPSTTRCPRCKAVQYCSMKCLIMDWKWHKVDCIARVDSTPNERSRDVGMLQNSYEEEDNVQSSGPLSLECNPAGNTSLKSPIEVSQGPTNKVLLYLMDEVAKSRKETLSLQSKLDEWKNLANFEREKFQSIKRQSNYQLLVLKKEKESISDDEKKAYHVIHSLHKRLNHLQNSVQESNAEKRKLEEHVQCLESECADLKKVLQEKHKRAQRLTMECGKSQEAAKMAMREVEVVRQEIQEKREHAQHLKENFRRDLIFAESRAAIAEEKLSDLYRKIKISDYKLCSICLSNDNDLAFGCGHMTCRDCGSKLSRCPICRELITNHIRLFPG 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01967 554 Coils Coil 448 493 - -
Phco9g01967 554 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 494 553 IPR013083 -
Phco9g01967 554 ProSiteProfiles Zinc finger MYND-type profile. 221 257 IPR002893 -
Phco9g01967 554 Pfam Prokaryotic RING finger family 4 509 548 - -
Phco9g01967 554 SMART ring_2 509 541 IPR001841 -
Phco9g01967 554 Pfam MYND finger 221 257 IPR002893 -
Phco9g01967 554 Pfam MYND finger 124 161 IPR002893 -
Phco9g01967 554 MobiDBLite consensus disorder prediction 172 191 - -
Phco9g01967 554 Gene3D - 205 262 - -
Phco9g01967 554 Gene3D - 114 166 - -
Phco9g01967 554 PANTHER PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED 109 208 - -
Phco9g01967 554 MobiDBLite consensus disorder prediction 172 193 - -
Phco9g01967 554 ProSiteProfiles Zinc finger MYND-type profile. 124 161 IPR002893 -
Phco9g01967 554 Coils Coil 385 440 - -
Phco9g01967 554 ProSiteProfiles Zinc finger RING-type profile. 509 542 IPR001841 -
Phco9g01967 554 FunFam Ubiquitin carboxyl-terminal hydrolase 15 116 165 - -
Phco9g01967 554 SUPERFAMILY RING/U-box 496 548 - -
Phco9g01967 554 SUPERFAMILY HIT/MYND zinc finger-like 121 162 - -
Phco9g01967 554 SUPERFAMILY HIT/MYND zinc finger-like 218 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01967 Phco-Chr9 44546473 44553840 Tandem