Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco9g01966 | ATGATCATAGTGTTGCTGATAATATCCCTGCTAGGGTTTCTTTTCTGGCTAGAAAACAAGTTATCCAATCATAATTCCAGTGAGGCCAATGATTTGAAAGAACATATGCAGATCAGTGATGAAAGAAGCAACTACCCCTTCTGTGAACAAGATACTGCGCACTATGTTTGCTCCTTCTGTGGTAGATTAAGCAACACAGTTACAACATGTTCACGCTGCAAAACTGCCATGTACTGCTCAAACACATGCAATTTTAAGCACTGGAGGCTTGGCCATAAATATGAATGCGTTGAGATTGAAGGGTCAGAAGATCAGCAAGAATCACCTTCTCATGGAAGCCATTGTCTTCTCATGGATAAATACTCATCAAATGAAGTTGAGGAGAGAATATATGAAGGAGATGTTTACTATATTGAAGGAGGAGAAAAGAGTGGAGAGTTCAGTGATGAAACATCATTGATGTGTGGAAATGGCATTGTGGATGGAAATGAAGGGTGTGCAGTGTGTGGTAATCCAAGCTCTAAAGTATGTTCAAGATGCAAAGCCATAAAATATTGCTCAAGAACATGCCAACATTTCGATTGGAGATCAGGGCATAAGTTTCAATGTCATGTTGAGAAGGCAAATTCAAATCAGGTTGTGAATCCTGAGAATTCATATGAACTGGAGGATAATGTTCATTCATCTAGTCCTCTTTGCTTGGAATTTTACTCAGGAAGCAGCAGTTCCAGGGCCCTGATTCCGACTCAGGAAGCAACCAAGAATAACAACCAGAAGGAGGTTGAAGAACAATTGAGAAGCCTGAAAGAAGAACTGACAAAGATTAAAGATGAGAACAAATGGCTACGATCAGAGCGTGACGAATGGGAAGTGCGAACTAGGAATTCTATAGATAGACTTTACAGCTTCAGGAAAGAAAATGAACACCAGCTTTTTATTTTGAAGCACGAAAATGAGTTGATGTCAAATGCTGAGAAGCAAGCAACTCAAATGGTTAATAGTTTATCTCAGAGGGTACACTGCTTGCAGATTGCAGCGGAAAGTGGAGTTGAAGAGAGGCAAAAACAAGAAGAATATATACATATGCTGCAGAACGAATGTGCTAAACTTAAGATAGAGCTACAAGAACAGAAAAAGTGTGTCAAAAGGCTTACATTGGAGCTTGATAAGACTAAACTTCCTGTGAGAGTAACAGAAGACACAAGGCAAAAGCTAGTCAGTGCTTCCAGTGAAATTGCAGCTGTTGAATCCAATGCTGCTGGTGCTGAGGTATCCCAGCCTATTAGTTTGAGTAGAAACCCAACCTTTACAAGACAGGGTTGTATGATTTGCCTAACCAATGAGAAGAACATGGCCTTTGGTTGTGGACACATGACATGTTTTGAGTGTGGATCAAAAATTCGCAAGTGTCATATATGTCGAAGGAAGATTACCAATCGTATCAAGTTGTTTCCTGATTAA | 1461 | 0.399 | MIIVLLIISLLGFLFWLENKLSNHNSSEANDLKEHMQISDERSNYPFCEQDTAHYVCSFCGRLSNTVTTCSRCKTAMYCSNTCNFKHWRLGHKYECVEIEGSEDQQESPSHGSHCLLMDKYSSNEVEERIYEGDVYYIEGGEKSGEFSDETSLMCGNGIVDGNEGCAVCGNPSSKVCSRCKAIKYCSRTCQHFDWRSGHKFQCHVEKANSNQVVNPENSYELEDNVHSSSPLCLEFYSGSSSSRALIPTQEATKNNNQKEVEEQLRSLKEELTKIKDENKWLRSERDEWEVRTRNSIDRLYSFRKENEHQLFILKHENELMSNAEKQATQMVNSLSQRVHCLQIAAESGVEERQKQEEYIHMLQNECAKLKIELQEQKKCVKRLTLELDKTKLPVRVTEDTRQKLVSASSEIAAVESNAAGAEVSQPISLSRNPTFTRQGCMICLTNEKNMAFGCGHMTCFECGSKIRKCHICRRKITNRIKLFPD | 486 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco9g01966 | 486 | ProSiteProfiles | Zinc finger MYND-type profile. | 57 | 96 | IPR002893 | - | |
| Phco9g01966 | 486 | Pfam | Zinc finger, C3HC4 type (RING finger) | 439 | 478 | - | - | |
| Phco9g01966 | 486 | Pfam | MYND finger | 166 | 203 | IPR002893 | - | |
| Phco9g01966 | 486 | Pfam | MYND finger | 57 | 96 | IPR002893 | - | |
| Phco9g01966 | 486 | SUPERFAMILY | HIT/MYND zinc finger-like | 53 | 98 | - | - | |
| Phco9g01966 | 486 | Gene3D | - | 160 | 209 | - | - | |
| Phco9g01966 | 486 | ProSitePatterns | Zinc finger MYND-type signature. | 166 | 203 | IPR002893 | - | |
| Phco9g01966 | 486 | ProSiteProfiles | Zinc finger RING-type profile. | 441 | 474 | IPR001841 | - | |
| Phco9g01966 | 486 | Coils | Coil | 353 | 387 | - | - | |
| Phco9g01966 | 486 | Coils | Coil | 251 | 285 | - | - | |
| Phco9g01966 | 486 | Gene3D | - | 44 | 101 | - | - | |
| Phco9g01966 | 486 | PANTHER | PCDC2 PROGRAMMED CELL DEATH PROTEIN 2 -RELATED | 163 | 339 | - | - | |
| Phco9g01966 | 486 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 431 | 485 | IPR013083 | - | |
| Phco9g01966 | 486 | SUPERFAMILY | HIT/MYND zinc finger-like | 164 | 206 | - | - | |
| Phco9g01966 | 486 | ProSiteProfiles | Zinc finger MYND-type profile. | 166 | 203 | IPR002893 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco9g01966 | Phco-Chr9 | 44530046 | 44536604 | Wgd |