Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01963 ATGTCTACGTCCACCGCTGGAGGGGCTGGATCCAATGATTCCAATGCTGCCAGGAGACAAAGCAAGAGACCCAAGTACTCAAAGTTTACACAACAAGAACTACCAGCGTGCAAGCCTATTCTAACACCACGAGCAGTTATTTCAGCATTCTTGATTGTCACCATTGTGTTCATTCCCATCGGAGTTGCTTCGTTGATTGCTTCGCATGATGTTGTTGAAATTATTGATAGGTATGACTCGCAGTGCATTCCGCCAAATGTGACAGACAAGGTGTCATACATTCAGACTCCTGGAGAAAAGATATGCAACAGGGAGCTACATGTGGACAAACATATGAAGTCTCCTATCTATGTGTACTACCAGCTTGACAACTTTTACCAGAATCATCGGCGGTATGTTAAAAGCCGAAATGATGAGCAGCTGAGGGATTCTAAAAATGAAAACTCAACAAGTGGTTGTGATCCTGAGGATGAGGCAAATGGAATGCCAATTGTACCCTGTGGTCTTATAGCTTGGAGCTTGTTCAACGATACATACAGCTTCTCACGCAACAGCGTTAATTTGACAGTGAACAAGAAAGAAATTTCTTGGAAAAGTGATAGGGATCACAAATTTGGAACTGATGTTTTTCCTAAAAATTTCCAGAATGGTTCTTTAGTCGGCGGTGGTCATCTTGATGAACACACACCTTTGAGTCAGCAAGAGGATCTTATTGTTTGGATGCGGACTGCAGCTTTGCCAACTTTTAGGAAGTTGTATGGAAGGATTGAGGTGGATTTGGAGAAAGGTGATGTCATACAAGTGGATTTGAAAAATAACTACAACACATACAGTTTCAATGGCAAGAAGAAGCTTGTTCTGTCTACTACTACCTGGCTCGGCGGGAAGAATGACTTCCTTGGCATTGCTTATCTAACTGTTGGAGGATTGAGCTTCTTTTTGTCCATGGCCTTTACTGTTGTATATCTTGTCAAGCCAAGGCAACTTGGAGATCCCTCTTATCTGTCATGGAATAGGAACCCTGGAGGGCAATGA 1035 0.4271 MSTSTAGGAGSNDSNAARRQSKRPKYSKFTQQELPACKPILTPRAVISAFLIVTIVFIPIGVASLIASHDVVEIIDRYDSQCIPPNVTDKVSYIQTPGEKICNRELHVDKHMKSPIYVYYQLDNFYQNHRRYVKSRNDEQLRDSKNENSTSGCDPEDEANGMPIVPCGLIAWSLFNDTYSFSRNSVNLTVNKKEISWKSDRDHKFGTDVFPKNFQNGSLVGGGHLDEHTPLSQQEDLIVWMRTAALPTFRKLYGRIEVDLEKGDVIQVDLKNNYNTYSFNGKKKLVLSTTTWLGGKNDFLGIAYLTVGGLSFFLSMAFTVVYLVKPRQLGDPSYLSWNRNPGGQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01963 344 MobiDBLite consensus disorder prediction 1 17 - -
Phco9g01963 344 PIRSF Lem3/Cdc50 1 340 IPR005045 GO:0016020
Phco9g01963 344 MobiDBLite consensus disorder prediction 136 152 - -
Phco9g01963 344 PANTHER CELL CYCLE CONTROL PROTEIN 50 18 337 IPR005045 GO:0016020
Phco9g01963 344 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 65 328 IPR005045 GO:0016020
Phco9g01963 344 MobiDBLite consensus disorder prediction 136 159 - -
Phco9g01963 344 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01963 Phco-Chr9 44484222 44488484 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01963 9 44484222 44488484 Phco9g01963 9 44484222 44488484 ECH
Phco10g00492 10 4992000 5000648 Phco9g01963 9 44484222 44488484 PCT