Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01959 ATGGTAGAAGAAAATGGGAAGAAGAAGATCGGAATAAGAAAAGTGGAAGAGGAATATCAGAAGAAGAAGAATGGAAGAAGAAGATCGGAAGAAGAGGAATGGAAAAGGAAGATTGGAAGAAGAAGAATGGAAGAAGTAGAATGGAAGAAGAAGATCGAAAGTAGAAGAATGGAAGAAGAAGATCGTAAGCAGAAGAATGGAAGAAGAAGATTGGAAGAAGAAGATCGGAAGAAGAAGAATGGAAGAAGAAGCATAGAATCTAAGCCTGAAATGGATCCCCAAGAGTTGAAATGGATGATCGGGATCATGGCATCTGTTACTGTAGTGAAGTTCATATTCATGATCTACTGTAGAAGGTTTAAGAATGAAATTGTGAGAGCTTATGCACAAGATCATTTTTTTGATGTTATTACTAACTCAGTTGGATTAGTTGTTGTTGTGCTTGCTGTGAAGTATTCTTGGTGGATTGATCCAATGGGAGCTATTATTATAGCATTGTACACAATTAGCATATGGGCAAAGACAGTGATTGAGAATGTATGGTCTCTTATTGGAAGAACAGCACCACCTGATTTTCTAGCAAAGTTGACATATCTGCTATGGAATCACCATGAAGAGGTTAAGCACATAGACACTGTGAGAGCATACACCTTTGGTGCTCATTACTTTGTTGAAGTAGATATCGTGTTGCCAGAAGACATGCCTCTCAATCAAGCACACAACATTGGTGAGACATTGCAGGAAAAATTGGAGCAACTTCCTCAAGTTGAAAGAGCCTTCGTCCACATTGATTTTGAGTTTACTCACAGACCTGAACATAAGATGATGAGTGTTGCCTCTTCGGATACATTTGTAGATGAAACCAAGTTTTCAGACAATAATTTTGATGAAGAAGAGTCACAACCACCAGAAGAGGAGGCGTTGGAGGAGAGTATTGAGCGGCTTGAGTGCGGAGCATTCGTGGGCCACATTGGGAATTCCATAATGAAAGAAAGGTGTGCGCAGGTGAACGTTGGAAAAACAATCATGAAAGAGGCAATTAGTGGGCAGTGTGCAACAAAACTTGGTAGCCCTGGGAGCCCTAGTACCAAGGTTGTCCAAGATGTCCTTACTAATTTATTGGTGGCAGTAGAGGCTGTGAAAAGCATTTCCAAGCCCATTATGGGCTTAGCCCAATCACTTTCTAACCCTACCCAAACCAGTAACGCAAGGAGTGGAACACGTGAAAAGGGCATGGGAGCGGAAAAGAACGAGCTTGGGTCACGAGAAGATGCTGATTGTCAAACCAAGATCCGCGATTCAAAGGATGCAAAGGGGGAATCCTCTCCATGCATGGAAAAGCCATCAGAACCAAGGAGATGCTCGGGTCAATCACCTGTTGACTTCGCCCAGTTGTGCGAAGGAAGGAACGGGACCTGTGATGAGGATGAGGGAGCGGAAGAGATCGAATGTAGGTCTAGAGAGGTTGATGAACGTCAATCCAAGGTATGCGAGTTGAAGGGAGAAAAGGGGAAGGTATCTCTATGCTTGCAAACATCACTAGAGCTAAGGCGGTGCTCGACGGTGGGTTACGGTGATAAAGGCGTTCTGAATGCGATGGAACCTACTCTGTTCGAAGTCCCACAAACAGAGCTTATCCACCATGGTGATCTCGGGAGGGAAGGAGGCCAGCAAAGTCCTGATCCGTTAATGCTATCATGCTTTCCAAGTGCTCAAGTCGCAGAATGCGGAGACAATTTTACTACCCCTACGCTTGGGTGGAAGCAGCGAGGCCTTCTAGAAATTGGGGAACCAAGCAGGCAACCCAGGTGGAGGTCTTTGTCAAGCATAATTAACCTACAAATCGGGAGTACTAGCCACACCAGCCATACCGGGTTAGTATCTAATTCTGTGAGTAGTTCTGCTTCTGATGGTGGCATTGTCAATTGCAATAGAAGGTTTTGGAATTCAATCGATATATCTGAGCCTGTTAAGATTTGGGAGATAGGAAAATAG 1995 0.4381 MVEENGKKKIGIRKVEEEYQKKKNGRRRSEEEEWKRKIGRRRMEEVEWKKKIESRRMEEEDRKQKNGRRRLEEEDRKKKNGRRSIESKPEMDPQELKWMIGIMASVTVVKFIFMIYCRRFKNEIVRAYAQDHFFDVITNSVGLVVVVLAVKYSWWIDPMGAIIIALYTISIWAKTVIENVWSLIGRTAPPDFLAKLTYLLWNHHEEVKHIDTVRAYTFGAHYFVEVDIVLPEDMPLNQAHNIGETLQEKLEQLPQVERAFVHIDFEFTHRPEHKMMSVASSDTFVDETKFSDNNFDEEESQPPEEEALEESIERLECGAFVGHIGNSIMKERCAQVNVGKTIMKEAISGQCATKLGSPGSPSTKVVQDVLTNLLVAVEAVKSISKPIMGLAQSLSNPTQTSNARSGTREKGMGAEKNELGSREDADCQTKIRDSKDAKGESSPCMEKPSEPRRCSGQSPVDFAQLCEGRNGTCDEDEGAEEIECRSREVDERQSKVCELKGEKGKVSLCLQTSLELRRCSTVGYGDKGVLNAMEPTLFEVPQTELIHHGDLGREGGQQSPDPLMLSCFPSAQVAECGDNFTTPTLGWKQRGLLEIGEPSRQPRWRSLSSIINLQIGSTSHTSHTGLVSNSVSSSASDGGIVNCNRRFWNSIDISEPVKIWEIGK 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01959 664 Pfam Cation efflux family 92 183 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Phco9g01959 664 Gene3D Cation efflux protein transmembrane domain 80 183 IPR027469 -
Phco9g01959 664 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 188 264 IPR036837 -
Phco9g01959 664 Coils Coil 54 77 - -
Phco9g01959 664 Gene3D Cation efflux protein, cytoplasmic domain 188 265 IPR036837 -
Phco9g01959 664 MobiDBLite consensus disorder prediction 53 89 - -
Phco9g01959 664 SUPERFAMILY Cation efflux protein transmembrane domain-like 93 185 IPR027469 -
Phco9g01959 664 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 91 274 - -
Phco9g01959 664 Coils Coil 12 32 - -
Phco9g01959 664 FunFam Metal tolerance protein 4 191 281 - -
Phco9g01959 664 ProSiteProfiles Ig-like domain profile. 535 643 IPR007110 -
Phco9g01959 664 MobiDBLite consensus disorder prediction 1 36 - -
Phco9g01959 664 Pfam Dimerisation domain of Zinc Transporter 191 264 IPR027470 -
Phco9g01959 664 MobiDBLite consensus disorder prediction 392 457 - -
Phco9g01959 664 MobiDBLite consensus disorder prediction 392 407 - -
Phco9g01959 664 MobiDBLite consensus disorder prediction 409 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01959 Phco-Chr9 44413751 44424480 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01959 9 44413751 44424480 Phco9g01959 9 44413751 44424480 ECH
Phco10g00498 10 5112869 5116109 Phco9g01959 9 44413751 44424480 PCT