Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01954 ATGGAAATGCAGTGGTCAATTGTAGATGATGGCTATATCATTGATTTGATGGATTTGGCTCGCCGCAGCAACACCAACAACAACACTGAATTTTTAAGATCAACTGAAGATGGTGGTGTTTATATCTTTGATTCCATGAACTTGGATCACATCAACAACATGCAGAACAATGGCAGTAGAATTTTAAGATCAACTCAAGATGGTGTTTTCATCTATGATTCTATGCAAAACAACCATGATTCTGTCAAAAATCTTGAAAGGTTCATAATTGAAGAAAAAAGAGAAGAGTCTTGTTGCATATGTCTTGGGGAATTCTCAATTGGATCAAGAGCAATTCGCATGCCCCAACCATGTTCTCATATCTTTCATCAACACTGCATCACAAAATGGCTCAACATCAGTCACACATGTCCTTTGTGTCGCAGGAACATCTAG 435 0.3793 MEMQWSIVDDGYIIDLMDLARRSNTNNNTEFLRSTEDGGVYIFDSMNLDHINNMQNNGSRILRSTQDGVFIYDSMQNNHDSVKNLERFIIEEKREESCCICLGEFSIGSRAIRMPQPCSHIFHQHCITKWLNISHTCPLCRRNI 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01954 144 SMART ringv_2 97 141 IPR011016 GO:0008270
Phco9g01954 144 Pfam Ring finger domain 97 141 IPR001841 -
Phco9g01954 144 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 60 142 - -
Phco9g01954 144 SUPERFAMILY RING/U-box 87 144 - -
Phco9g01954 144 SMART ring_2 98 140 IPR001841 -
Phco9g01954 144 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 144 IPR013083 -
Phco9g01954 144 ProSiteProfiles Zinc finger RING-type profile. 98 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01954 Phco-Chr9 44384249 44384683 Dispersed/Tandem