Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01948 ATGGCAAAGAAGCAAGAGAAGAAGGTGAACGTCTCTGGCAAACCGAAGCACTCTCTCGACGTTAACCGCAGCAATGACTCGAAGAAGGAGAGGCGCTCTGCCGCCACCGTGCGCCGCCTCAAGATGTACAAGACCAGGCCCGTTCGTGACCGAAAAGGCAAAGTCCTCTCCAACGAGTTTCAGTCCAAGGATCTTCCCAGCACACGTATTCAACCTGATCGCCGATGGTTTGGGAATACGCGTGTTGTGAATCAGAAGGAGCTCGAGTTCTTCCGGGAAGAGCTGCAGAGTCGCATGTCGAGTAATTACAATGTGATTCTTAAAGAGAAGAAACTGCCGCTGTCATTGCTCAATGATCACCAGAAGCAAGTTAGAGTTCATCTGCTTGATAGAGAGCCTTTTCAAGATGCTTTTGGACCTAAGACCAAAAGAAAGCGCCCCAGCCTCTTGGCTGCTGACTACGAGTCCTTGCTGAAGAAAGCTGATGGTTCTCAAGATGTTTTTGAACAGAAGTGTGGTTCTAGTGCATCTGGAGAAGCTGATGATAGGGATGGATTTAGAGATTTAGTGCGACATACCATGTTCGAAAAGGGTCAAAGTAAACGCATATGGGGCGAGCTTTACAAAGTGATAGATTCGTCAGATGTTGTTGTACAGGTTCTAGATGCGAGGGATCCACAAGGCACAAGATGTTACCATTTAGAGAAGCATTTGAAGGAAAATTGTAAGCACAAACACATGGTGCTTTTATTGAACAAGTGTGATCTAGTTCCTGCCTGGGCAACAAAAGGATGGCTTAGAGTTTTGTCTAAAGAATTTCCAACTCTGGCATTCCATGCAAACATTAACAAGTCCTTTGGAAAAGGTTCTCTTCTATCTGTACTTAGACAATTTGCACGTTTGAAACGGGATAAGCAAGCAATATCTGTTGGATTTGTTGGATATCCAAATGTTGGGAAGTCATCAGTAATCAATACTTTGCGTACAAAGAATGTCTGCAAGGTTGCTCCAATTCCAGGGGAAACGAAAGTCTGGCAGTATATAACGCTTACCAAGAGAATCTTTTTGATTGATTGTCCAGGTGTAGTGTACCACAACAAGGATTCTGAAACAGATGTTGTGTTAAAGGGTGTGGTGCGTGTAACTAATTTGAAAGATGCTGCAGACCATATAGGTGAGGTTTTGAAACGTGTGAAGAAAGCACATTTGGAGAGAGCATATAAAATAAAAGAGTGGGATGACGAAAATGACTTCTTACTGCAGCTTTGCAAATCAAGTGGCAAACTTCTGAAGGGTGGTGAACCTGACCTGATGACTGGAGCAAAGATGGTACTTCATGACTGGCAGAGGGGTAGAATTCCGTTTTTTGTTCCTCCTCCTAAGCAGGAAGAAGAGTCTGAGGAACCTAATGTTAATGGGGTTGACATAGATGATGCAGTTGATGGCAATGAAGCATCTGCTGCTATTAAGGCTATCGCAGATGTTCTTTCGTCACAGCAGCAAATAAGTGTCCCTGTTCAAAAGGATTTATATAGTGAGAATGAGTTGAAGGGGGAGGCGACTGACCAAACTCCTAACCACAATGCAGAAGAAGATATTCCGGCTTCTGATAGTGACACATCTGACCAGGATTCACCTATTAAGATTCCATCTGAATCGCTTCTTTCCGCTGAATTGGACCCAACCATCGAGTCATAA 1698 0.4399 MAKKQEKKVNVSGKPKHSLDVNRSNDSKKERRSAATVRRLKMYKTRPVRDRKGKVLSNEFQSKDLPSTRIQPDRRWFGNTRVVNQKELEFFREELQSRMSSNYNVILKEKKLPLSLLNDHQKQVRVHLLDREPFQDAFGPKTKRKRPSLLAADYESLLKKADGSQDVFEQKCGSSASGEADDRDGFRDLVRHTMFEKGQSKRIWGELYKVIDSSDVVVQVLDARDPQGTRCYHLEKHLKENCKHKHMVLLLNKCDLVPAWATKGWLRVLSKEFPTLAFHANINKSFGKGSLLSVLRQFARLKRDKQAISVGFVGYPNVGKSSVINTLRTKNVCKVAPIPGETKVWQYITLTKRIFLIDCPGVVYHNKDSETDVVLKGVVRVTNLKDAADHIGEVLKRVKKAHLERAYKIKEWDDENDFLLQLCKSSGKLLKGGEPDLMTGAKMVLHDWQRGRIPFFVPPPKQEEESEEPNVNGVDIDDAVDGNEASAAIKAIADVLSSQQQISVPVQKDLYSENELKGEATDQTPNHNAEEDIPASDSDTSDQDSPIKIPSESLLSAELDPTIES 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01948 565 PANTHER GTP-BINDING PROTEIN-RELATED 28 538 - -
Phco9g01948 565 MobiDBLite consensus disorder prediction 1 37 - -
Phco9g01948 565 FunFam Nuclear/nucleolar GTPase 2 203 365 - -
Phco9g01948 565 Gene3D - 194 364 IPR027417 -
Phco9g01948 565 ProSiteProfiles Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile. 204 365 IPR030378 GO:0005525
Phco9g01948 565 MobiDBLite consensus disorder prediction 513 565 - -
Phco9g01948 565 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 436 IPR027417 -
Phco9g01948 565 Pfam 50S ribosome-binding GTPase 310 400 IPR006073 GO:0005525
Phco9g01948 565 CDD NGP_1 206 362 IPR024929 GO:0005730
Phco9g01948 565 MobiDBLite consensus disorder prediction 517 531 - -
Phco9g01948 565 FunFam Nucleolar GTP-binding protein 2 367 457 - -
Phco9g01948 565 PRINTS GTP1/OBG GTP-binding protein family signature 310 330 IPR006073 GO:0005525
Phco9g01948 565 PRINTS GTP1/OBG GTP-binding protein family signature 356 371 IPR006073 GO:0005525
Phco9g01948 565 Gene3D - 365 457 IPR023179 -
Phco9g01948 565 Pfam NGP1NT (NUC091) domain 42 166 IPR012971 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01948 Phco-Chr9 44358158 44363040 Dispersed