Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01935 ATGGAATCTCCGTTCAAAGCAGGAATTCTGAAAGGGAAGGTCGCTCTGATAACCGGAGGAGCCTCGGGAATCGGTTTCGAAATTTCTACGCAATTCGGCAAACATGGAGCCTCCGTCGCGCTCATGGGTCGCCGCACCCAAGTTCTTCACTCCGCTGTCTCCGTTCTCCAATCCCTCTCCATTCCCGCGGTTGGGTTTGAGGGGGATGTGCGGAAGCAAGAGGATGCAGAGAGGGTAGTGGAATCAACGTTTAAGTATTTTGGAAGGATTGATATACTTGTGAATGCTGCGGCTGGGAACTTTCTTGTGTCGGCAGAGGATCTCTCCCCAAATGGCTTTCGAACAGTTTTGGACATTGATTCTGTTGGCACGTTCACAATGTGCCGTGAAGCACTAAAATATCTCAAGAAAGGGGGAGAAGGAAGGAGCAGCTCTTCTGGTGGGGGATCAATAATAAACATCAGTGCTACCTTGCATTATACAGCTTCTTGGTACCAAATTCACGTGTCTGCTGCAAAGGCAGCTGTTGATGCCACTACAAGAAACTTGGCACTAGAATGGGGAACAGACTATGATATCAGAGTCAACGGAATTGCACCCGGTCCAATAAGTGACACTCCTGGCATGAGTAAACTAGCTCCCGACGAAATAAGTAGCAAAGCCAGAGATTACATGCCACTGTATAAACTTGGGGAGAAATGGGATATAGCCATGACTGCAATTTTCCTGGTATCAGATGCAGGAAAATTCATCAATGGCGACATTCTTATAGTTGACGGAGGACTTTGGCTGAGCCGGCCTCGTCATTTACAGAAAGAGGCTGTGAAGCAAGTATCTCGATCAGTAGAAAAGAGATCAAGAAATGCACCAGTTGGTGTTCCAAAAAGCAAGCTCTGA 897 0.4738 MESPFKAGILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRTQVLHSAVSVLQSLSIPAVGFEGDVRKQEDAERVVESTFKYFGRIDILVNAAAGNFLVSAEDLSPNGFRTVLDIDSVGTFTMCREALKYLKKGGEGRSSSSGGGSIINISATLHYTASWYQIHVSAAKAAVDATTRNLALEWGTDYDIRVNGIAPGPISDTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMTAIFLVSDAGKFINGDILIVDGGLWLSRPRHLQKEAVKQVSRSVEKRSRNAPVGVPKSKL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01935 298 CDD TER_DECR_SDR_a 10 264 - -
Phco9g01935 298 FunFam Short-chain dehydrogenase reductase 3 269 - -
Phco9g01935 298 PANTHER PEROXISOMAL 2,4-DIENOYL-COA REDUCTASE 2 286 IPR045017 GO:0008670|GO:0009062
Phco9g01935 298 MobiDBLite consensus disorder prediction 278 298 - -
Phco9g01935 298 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 264 IPR036291 -
Phco9g01935 298 PRINTS Glucose/ribitol dehydrogenase family signature 191 208 IPR002347 -
Phco9g01935 298 PRINTS Glucose/ribitol dehydrogenase family signature 143 159 IPR002347 -
Phco9g01935 298 PRINTS Glucose/ribitol dehydrogenase family signature 169 188 IPR002347 -
Phco9g01935 298 PRINTS Glucose/ribitol dehydrogenase family signature 88 99 IPR002347 -
Phco9g01935 298 PRINTS Glucose/ribitol dehydrogenase family signature 14 31 IPR002347 -
Phco9g01935 298 PRINTS Glucose/ribitol dehydrogenase family signature 226 246 IPR002347 -
Phco9g01935 298 Gene3D - 2 289 - -
Phco9g01935 298 Pfam Enoyl-(Acyl carrier protein) reductase 19 262 - -
Phco9g01935 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 IPR002347 -
Phco9g01935 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 IPR002347 -
Phco9g01935 298 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01935 Phco-Chr9 44232332 44235569 Dispersed/Proximal