Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01934 ATGGTTTTTGGTGAGGTAGCTGAAGGATTTGAGACTTTAACTAGAATAAATGAGGCTTACGTAGATGACAAAGGAAGACCATATAAAAATATAAGAATCAAGCACACGTACATCCTAGAGGATCCTTATGATGATCCTTCTCAGCTATCTGAGTTCATTCCTGATGCTTCCCCAGAAGGAAAACCTAAAGATGAGGTTGAGGATGAAGTACGACTTGAAGATGATTGGGTGCCCATGGATGAACAATTAAATCCAGCAGAACTTGAGGAGGTTATCAGATCAAAGGAAGCACATTCTAGGGCAGTTGTACTTGAGAGTATTGGGGATATTCCTGATGCTGAGATTAAGCCTCCCGACAATGTATTGTTTGTCTGTAAATTGAACCCAGTTACCGAGGATGAGGACTTGAATACTATATTTTCTCGCTTTGGAACTGTATCATCGGCTGAAATCATCCGTGATCACAAAACTGGTGACAGTTTATGCTATGCTTTTATAGTATCTTATATTTACTCATTGACAGAATTTGAGGACAGACAGTCATGTGAGCAAGCATATTTTAAGATGGATAATGCTTTGATTGATGATCGAAGGATACATGTGGATTTTAGTCAAAGTGTGGCAAAATTGTGGTCCCAATACAAGAGGAAAGATCAAAAGGGTAAAGGTAAGGATAACGATATCTGTTCTTACCAATATCGCAAGCTATATGAAATGGTTTTTGATGGAGATGATAACCCAGAAAGTCCAAGGCAAGATGTAAAACACCAAAGGCATGACAGGGATGACCCAGTTGAGAGAAAAGGTAGGGATGAAAATTTTAAAGATTATAGAAGTCGTAAGGATCAGGATATGGTAGACTCGAAAAGAGATAGGTGTGGTGAGAGAAGCAGAGGGCATGGGGGAAATTTAGAAAACAAAGCACGCTATGAAAGAGGTGCAAGAGAATTGGATTCCCATGCTGACAAGAAAGACAGAGATAGGCACATGGGAAGAGGAAATGATGATTACAGGTGGAAAGATGATCATGAATCCAGAAAAAGAGATGAAGATGATAGCTACAAGCGTAAAGATGAGCGAGACTCTAGAAGAAGAGATGAAGATGATAGCTACAGAGAAAGACGAGCTAGTCGAGATGATAGGAGAAACACAGATTCTAGCCATTTGGAGAGAAGGAATGACAGAGGTTATAGGAAGAGAGCTGAAGACAGTGGAAAGCAAGATGTGAAGATTGATTCTGGACGAAGAAACAAAAGTCCAGGTGATGATGATTTCAAAAATGGAAGGAAAGATGAAGATTACAGACACAGAAAGGAGGAACGAGGGTATAAAAGGCAAGATATTGAAGCTGATGAGGATTACAAACGTAGAAGGGAGGAACGTGGACACAAAAGACAAGATATTGAAGGTGATGATTATCCTCTTAGGAGGCATCATGGTGACAGGAGATGA 1452 0.3988 MVFGEVAEGFETLTRINEAYVDDKGRPYKNIRIKHTYILEDPYDDPSQLSEFIPDASPEGKPKDEVEDEVRLEDDWVPMDEQLNPAELEEVIRSKEAHSRAVVLESIGDIPDAEIKPPDNVLFVCKLNPVTEDEDLNTIFSRFGTVSSAEIIRDHKTGDSLCYAFIVSYIYSLTEFEDRQSCEQAYFKMDNALIDDRRIHVDFSQSVAKLWSQYKRKDQKGKGKDNDICSYQYRKLYEMVFDGDDNPESPRQDVKHQRHDRDDPVERKGRDENFKDYRSRKDQDMVDSKRDRCGERSRGHGGNLENKARYERGARELDSHADKKDRDRHMGRGNDDYRWKDDHESRKRDEDDSYKRKDERDSRRRDEDDSYRERRASRDDRRNTDSSHLERRNDRGYRKRAEDSGKQDVKIDSGRRNKSPGDDDFKNGRKDEDYRHRKEERGYKRQDIEADEDYKRRREERGHKRQDIEGDDYPLRRHHGDRR 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01934 483 Gene3D - 1 50 IPR029000 -
Phco9g01934 483 MobiDBLite consensus disorder prediction 241 483 - -
Phco9g01934 483 SUPERFAMILY Cyclophilin-like 2 49 IPR029000 -
Phco9g01934 483 Gene3D - 112 231 IPR012677 -
Phco9g01934 483 SUPERFAMILY RNA-binding domain, RBD 106 216 IPR035979 GO:0003676
Phco9g01934 483 FunFam Peptidyl-prolyl cis-trans isomerase 59 208 - -
Phco9g01934 483 SMART rrm1_1 121 202 IPR000504 GO:0003723
Phco9g01934 483 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 122 200 IPR000504 GO:0003723
Phco9g01934 483 CDD RRM_PPIL4 117 207 - -
Phco9g01934 483 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4 1 404 IPR035542 -
Phco9g01934 483 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 120 206 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01934 Phco-Chr9 44224938 44230720 Proximal