Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01932 ATGGAAGACATCAACAGGTGGCTATTATCATCTTATTTGAATGAAAGTGTAAACCATGATTTTGCCATCAGAAGGTATTGTCCAGCAAGAATGGAGCAAGAGCAAGGAGGAGAGTGCCAAGATCGAGAGGGAGTAGTTTTTGATGATACTGAATTATGTTCTTCTGATGAAAGCACTCCTTGTTTGGGTTCATCAGAAGTTGATGACTTTGTTGATAGCTTCATCAACATGGATCAGTATGAGAAAGCAGATCAAGGGTACCAAGAGAAGCATCAAAGTTTTGGCCACTATGTGGTGAGTAATGATGAGGATGAGGCAGATGAATACTCCTCCATGAATGGTGTCTTTGGATATCTTCCAACCACCATGCAGGATTCAGAATTGGAGATCTATGAAAATCTCACAACATCCATGTTGGAGGAAGAGGTTGTTGCAATGAGTGACACTTTTGGTGCAATACCTGAGTTTATGCATTGTGCCAAAGAGGCCAACCTTGGTGTGGACCAAGGCTTAGAGTTGGTTCACATGCTGCTGGCCTGTGCTGAAGCTGTGGGGTGTAGGGACAACCAGCAAGCAGAGTTGCTGATTAGAAGAATTTGGACTTTGGCAAGCCCTTCAGGAGATGCACTGCAACGAGTTTCCTACTGTTTTGCCACAGGATTGAAGTGTAGGTTGTCACTTCTTCCTTATAATGTCATTACAAATGGTACACTCACAGGTACTTCCATGGATATGCCTTTGATCAACAGGGAGAATAAGATGGAAGCATTTCAACTTCTTTACCAAACCACACCTTACATTGCCTTTGGTTTCATGGCTGCAAATGAAGCCATATGCCAAGCATCACAAGGAAAGAGCTCAATACACATTGTTGATCTAGGAATGGAGCATACCCTTCAGTGGTCTTCCCTGATAAGGGCCTTTGCTTCAAGGCATGAGGGTCCTCCAATGCTCCGGATCACTGGATTAACCGACCATGAAGATAACTCTAAACTTCAAACTAGCATGAGTGTGCTTGTGGAGGAAGCAAGCTCTTTGGGAATGCATCTTGAGTTCCAGACAATTTCAGAGCCTGCATCTCCTTCTCTTCTTACTGTGGAGAAGCTGAACTTGAGAAAAGGTGAAGCTTTATTTGTCAATAGTATCTTGCAGTTGCACAAATATGTCAAAGAAAGTAGAAGCTATCTGAAGGAAATTCTGCAATCAGTAAAGAAGCTAGGTCCAACTGCTTTTACAGTGGTAGAGCAAGACACAAACCATAATGGCCCTTTCTTCCTTGGGAGATTTTTGGAATCACTTCACTATTACTCAGCCATATTTGATTCTCTTGAGGCATGTATGCCAAGAAATAGCCAACACAGGATGAAGATAGAGAGATTACACTTTGCAGAGGAAATTCAGAATATTGTAGCTTATGAGGGTCCAGAAAGAACAGAAAGACATGAAAGGGTGGACCAATGGAGAAGGCAATTAGGCCGTGCAGGATTTCAGGTGATGCCATTGAAGTGCACAAGCCAAGTTAGAATGATGCTTTCTGTTTATGACTGTGATGGATACACATTATCCTGTGAGAAGGGAAACCTTTTACTTGGATGGAAAGGAAGGCCAGTGATGATGTCTTCTGCATGGAAAGTGGCAAGTATGTGA 1647 0.4262 MEDINRWLLSSYLNESVNHDFAIRRYCPARMEQEQGGECQDREGVVFDDTELCSSDESTPCLGSSEVDDFVDSFINMDQYEKADQGYQEKHQSFGHYVVSNDEDEADEYSSMNGVFGYLPTTMQDSELEIYENLTTSMLEEEVVAMSDTFGAIPEFMHCAKEANLGVDQGLELVHMLLACAEAVGCRDNQQAELLIRRIWTLASPSGDALQRVSYCFATGLKCRLSLLPYNVITNGTLTGTSMDMPLINRENKMEAFQLLYQTTPYIAFGFMAANEAICQASQGKSSIHIVDLGMEHTLQWSSLIRAFASRHEGPPMLRITGLTDHEDNSKLQTSMSVLVEEASSLGMHLEFQTISEPASPSLLTVEKLNLRKGEALFVNSILQLHKYVKESRSYLKEILQSVKKLGPTAFTVVEQDTNHNGPFFLGRFLESLHYYSAIFDSLEACMPRNSQHRMKIERLHFAEEIQNIVAYEGPERTERHERVDQWRRQLGRAGFQVMPLKCTSQVRMMLSVYDCDGYTLSCEKGNLLLGWKGRPVMMSSAWKVASM 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01932 548 ProSiteProfiles GRAS family profile. 164 544 IPR005202 -
Phco9g01932 548 Pfam GRAS domain family 173 544 IPR005202 -
Phco9g01932 548 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 131 539 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01932 Phco-Chr9 44197877 44199523 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Phco9g01932 GRAS 8e-108 CL0063