Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01913 ATGGCTGTTGAAGCTCGTCACTTTAACATCTTCCATCCCCAACAACTCATACCCAATAGAGAAACCTTAACGAACACAATGGATGCCACCATCATGAACATGTACGCCACCCAAACGGGTTTGGGTAATTACTCGATGCTGCCTCTCTCCGGCACCACCACCGCGTCGGAGACCTTTTTTCCGCCGCCTCAGTACAGCTCTCTCCCTCAGAAACCCGCTGTCTTGGAATCCGACAACAGCACTCTCTCCCACAGCAACGTTGTTTCCGTTCCCAGAAAACGCTCCCGAGATTCCATCCACGACAACAATTTCCCTTTCCATTCCTACCCTCAGAAGAAAACCGATTCTTTCTCCTTCCTCGGCGAAGACATTTCCTCTCACATCCACCGTCAGCAACTCGACCTCGATGCCCTCGTCTCCCAACACATGGAGAAGGTTAGGATGGAATTAGAAGAGAAGAGAAAACGGCATGCAAGAAGATTGATGGAGAGTATTGAGGCGGAAATGGCGAAGAGGCTGAGAGAGAAAGAAGAAGAGATTTTGAAGATTGAGAAATTGAATTGGGTTTTAGAAGAGAAAGTGAGGTCGCTGAGCATCGAGAATCAGTTATGGCGCGACCTGGCTCAGACCAACGAGGCCACCGCCAATGCCCTCCGTACAAACCTCGAGCAGGTACTCGCGCAGGTGGCAGCGCCACCGGATACGGCGGAGGAAGATGCGGAGTCGTGCTGCGGGAGCAGCGACGAGGGGTGGCGCACATTAGCCACCGGGGCGCAGGAAAAGGAGAAAGAAGGTTGCAGCGGAAGTAAAGAAAATATTATTATTGATAATAATAATAAAAATAATAAAAATGAAAATAAAAATAATTACAAGGAGAATGAAAACAGCGGTGAGAAGAGATTGTGCAGAAAGTGTGGGAAAGAGGAATCGTGCGTGCTAATCTTACCGTGCAGGCACCTATGTGTCTGCACAGGTTGCGGGTCTAGCCTAGACTCTTGTCCTGTTTGTAAATCCTTCAAAAATGCTAGTGTTCTTGTAAACATGACATTATAA 1053 0.4824 MAVEARHFNIFHPQQLIPNRETLTNTMDATIMNMYATQTGLGNYSMLPLSGTTTASETFFPPPQYSSLPQKPAVLESDNSTLSHSNVVSVPRKRSRDSIHDNNFPFHSYPQKKTDSFSFLGEDISSHIHRQQLDLDALVSQHMEKVRMELEEKRKRHARRLMESIEAEMAKRLREKEEEILKIEKLNWVLEEKVRSLSIENQLWRDLAQTNEATANALRTNLEQVLAQVAAPPDTAEEDAESCCGSSDEGWRTLATGAQEKEKEGCSGSKENIIIDNNNKNNKNENKNNYKENENSGEKRLCRKCGKEESCVLILPCRHLCVCTGCGSSLDSCPVCKSFKNASVLVNMTL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01913 350 Coils Coil 148 193 - -
Phco9g01913 350 CDD mRING-HC-C3HC5_CGRF1-like 300 337 - -
Phco9g01913 350 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 81 345 IPR017066 -
Phco9g01913 350 ProSiteProfiles Zinc finger RING-type profile. 302 337 IPR001841 -
Phco9g01913 350 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 281 348 - -
Phco9g01913 350 MobiDBLite consensus disorder prediction 58 107 - -
Phco9g01913 350 MobiDBLite consensus disorder prediction 58 89 - -
Phco9g01913 350 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 276 346 IPR013083 -
Phco9g01913 350 Pfam Zinc finger, C3HC4 type (RING finger) 299 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01913 Phco-Chr9 43946066 43947575 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01913 9 43946066 43947575 Phco9g01913 9 43946066 43947575 ECH
Phco10g00587 10 6470850 6472019 Phco9g01913 9 43946066 43947575 PCT