Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01909 ATGAAGGATGGTGGTAGAAAACAAGGTACAATGACACCATGTGCAGCATGCAAGCTTCTTCGAAGGAGATGCGCACAGGACTGTGTCTTTGCTCCTTATTTTCCTGCAGATGAGCCCCATAAGTTTGCTAGTGTGCACAAGGTTTTTGGGGCTAGCAATGTCAACAAAATGTTACAGGAACTAGCAGAGTACCAAAGAAGTGATGCTGTGAGTTCAATGGTGTATGAAGCGAATGCAAGGGTGAGGGATCCCGTCTATGGATGTGTGGGAGCCATATCCTCTCTGCAGCGACAAGTTGATGTTTTACGAACCCAGTTGGCACTTGCAGAAGCAGAGGTTGTGCAGATGAGAATGAGCCAAGTTTCAGCTTCCTCTCATCAACCAAAACCAGTTCCTGCACCCTCCAATTCATCCTCACAAAACTTATCTCCATCAAGTACACTTGCCAACTCCCTCTTTGCCATGGAGATGGTCGTTGATCACCCAAACATGGGCGAGTCTTTGTGGTCATGTTAG 516 0.469 MKDGGRKQGTMTPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELAEYQRSDAVSSMVYEANARVRDPVYGCVGAISSLQRQVDVLRTQLALAEAEVVQMRMSQVSASSHQPKPVPAPSNSSSQNLSPSSTLANSLFAMEMVVDHPNMGESLWSC 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01909 171 Coils Coil 92 112 - -
Phco9g01909 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 140 - -
Phco9g01909 171 Pfam Lateral organ boundaries (LOB) domain 13 110 IPR004883 -
Phco9g01909 171 MobiDBLite consensus disorder prediction 119 145 - -
Phco9g01909 171 ProSiteProfiles LOB domain profile. 12 113 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01909 Phco-Chr9 43870528 43884323 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco9g01909 LOB 7.7e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01909 9 43870528 43884323 Phco9g01909 9 43870528 43884323 ECH