Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01903 ATGAACAGTGATTCAGTGGGAAGTGAAGGGTACTCTCTGCTGAAGGATTTAAGACTCGAAATTGAAGCCAAGGAAGGAACTTTCTCTCTCTGCTGTTGGCTTTATTTCACCAGTTTCTCTACATTCCCCGTTACCATTATTCAACAGGTTTACTCTGATATCTCGGAAAGTGCTCCATTTCTTGTTATTGATGATAATAAGAGAATCCATTTGTTACCAGTTCTTCTCTTACACGAAGAAGCTCCTGATACTGGCAATATAAATTCCTGGGCAGAAGTTCCACATGCAACTGTTGATTTTAAGTTCCCTTTGGAAAAATGGGTTCATGTTGAATGTCAGGTTTTTCCAGATTATATCCAGCTTCAGATTAATGGAGAGATTATAGGAGAAAAGTCTTTGTGTTCCTTGTTAAATGAGAAATCTGGTTCAAGTGATTTGAAGAAACTGACGTTGGCAAATGTTGGTGGAGATGGAAATAGTGTACAGGGTTATGTGCACAAGTTTGAAATATTTCCTAATATTTCTTCTACTAAGGATTACCATTTAAAGGACCCTCCTTTGAAGTTATCAATTGATGAATCATCTGTCTCTGAGATTGAAGAAGAAAGTGATGGTGTTTGGGCTGTTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGATGTTGTTCTATCAGATGCTTTTGGACAGCTTGTAGATAAGGAGAATGAGGTTTTTGCTTCACTTTTGTATGCCGATACCAGAGCACCAGTGGAGAATACAACTGATGATGAAGCACCCCTTTTAGCTAGTTATGATGGAATTGAATTTTCTTCTTGTGAAAGACCAAGTAAGCTTTTGCTGGGTCGTGCTTCATTTAAGCTCAAAATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTCTTCCTCATCAGATTTTGTGTCCCAAAATTAGGAAATTATCCTTTTTTTGAGACATACTCCCATCCAATTCGATGCATCTCCAGAAGCCGTAACACCAGATTGTCCACTCTGGTGTGGAAGAGGTCAACTGCTCTTAATTGCTCTAGTGTATCTCAATCTTCAGCTTTGGATGATGGGTCCTTGGAACTTCAGCATTCAGATCATGACGCACAAGCCAATCCACTAATGAAGCGGTTTAGACTTGGTCAAGACAAGATATCTGTATCAGTGAAGACTGACCCCACCACCTTAGAGCAACCTGATGAAGAATGTAACTCTCATGTCCAGACTGCTAACCAGGTTGAGAATGAACTTCCAAGAAGCTCCGATGGAAAGCCTGCAAATGTCAATGAAGCATATGATTCTCCATCTGATTCAGAGAGTATAGGGGAGGGAAATTCTCCTTTAAATAGTATGGCAAGTAAAAGATATCCAATATCTGATATGACCATTTTCAAATACAGCCTTGCGAGCTTGGCTGAGAGATCTCTCATACTTAAGGAAATTGCTACCTCTGCTTCTGACAAAGAAATTTTAGAATTGGCTAATCATGTGTCACACTATTCAGGATGTTTGCATCATGGAAACCAAATATTAATTGCCAAGAGATTGATAAGAGATGGAACTAATCTATGGAAGGTGATGTCGCCAAACAATCACCACATTCCTTGGGAGAATGCAGTGTATGAGATTCAAGAGCAATTCATGAAGATTGCTGGTTGCGGTTCAAGGTCTCTCTCACCTCAGGACATAAATCTTCTGAGAAGGTTCACTGGATGTCAAGAGTACCTAACACAAGATAACTTCGAGAAGTTGTGGTGTTGGTTATACCCTGTGGCATTTACAATATCAAGGGACTGGATAAATCCTATCTGGAATTCCACATCACCTAAGTGGATAGAAGGGTTCATAACCAAGGAGGAAGCAGAAGCTTCACTACAAGGTCCCACAGGATTTCAAGAACCTGGTACCTTTGTACTCCGATTTCCTACCTCACGAAGCTGGCCACACCCAGATGCAGGTAGCTTAGTTGTAACCTATGTTGGCAATGACTACAAACTGCACCACAGGCTACTTTCTTTGCATCAGATTTATGGCTCTGGCGATAAACGAGTTGACATGAAACCGCTTCAAGATATGCTATTGGCAGAACCTGAGCTCTCTCGATTGGGAAGGATAATAAGAAGTCATTAG 2142 0.4062 MNSDSVGSEGYSLLKDLRLEIEAKEGTFSLCCWLYFTSFSTFPVTIIQQVYSDISESAPFLVIDDNKRIHLLPVLLLHEEAPDTGNINSWAEVPHATVDFKFPLEKWVHVECQVFPDYIQLQINGEIIGEKSLCSLLNEKSGSSDLKKLTLANVGGDGNSVQGYVHKFEIFPNISSTKDYHLKDPPLKLSIDESSVSEIEEESDGVWAVVGGKASCRRNFSLDVVLSDAFGQLVDKENEVFASLLYADTRAPVENTTDDEAPLLASYDGIEFSSCERPSKLLLGRASFKLKISQLSSKCDNRFFLIRFCVPKLGNYPFFETYSHPIRCISRSRNTRLSTLVWKRSTALNCSSVSQSSALDDGSLELQHSDHDAQANPLMKRFRLGQDKISVSVKTDPTTLEQPDEECNSHVQTANQVENELPRSSDGKPANVNEAYDSPSDSESIGEGNSPLNSMASKRYPISDMTIFKYSLASLAERSLILKEIATSASDKEILELANHVSHYSGCLHHGNQILIAKRLIRDGTNLWKVMSPNNHHIPWENAVYEIQEQFMKIAGCGSRSLSPQDINLLRRFTGCQEYLTQDNFEKLWCWLYPVAFTISRDWINPIWNSTSPKWIEGFITKEEAEASLQGPTGFQEPGTFVLRFPTSRSWPHPDAGSLVVTYVGNDYKLHHRLLSLHQIYGSGDKRVDMKPLQDMLLAEPELSRLGRIIRSH 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01903 713 ProSiteProfiles Src homology 2 (SH2) domain profile. 615 713 IPR000980 -
Phco9g01903 713 MobiDBLite consensus disorder prediction 435 456 - -
Phco9g01903 713 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 172 IPR013320 -
Phco9g01903 713 SUPERFAMILY SH2 domain 609 703 IPR036860 -
Phco9g01903 713 CDD SH2_SHA 604 713 - -
Phco9g01903 713 MobiDBLite consensus disorder prediction 417 456 - -
Phco9g01903 713 Gene3D SH2 domain 601 710 IPR036860 -
Phco9g01903 713 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 5 704 IPR001217 GO:0003700|GO:0006355|GO:0007165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Phco9g01903 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01903 9 43810430 43820613 Phco9g01903 9 43810430 43820613 ECH