Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01885 ATGCTTCTTCTAGGTTTGCTTTCGGGAGTTATTGTTTCCGTTTACCTAACTTTTTTCTTCTTCACCCTTTTCTTCCTTTATACGTTTCTGTTAATATTGTCATTGATCATTCAGTTCAAGTGGATGTTACAAGGTCTGAAAATGCAGTGCAGGCCAATAATGGAGCTTGAATTCCAGAGAAACAAGGAGGGATTTGCTTTTCTTAAATGGGGGTCAACTGCATTCCCTAATATGCTTGTTGTTCCTCCTGGTTCTGGTATAGTGCATCAGGTCAATCTTGAATACTTGGAAGGCTTGTATTCAACAATGAGGGCCTACTCTATCCTGACAGTGTGGCGATGTCACGTGGGGGAATTGTTTGCTGGTGCTGCACAGTCTCTTGGGGCTGGGGCAATTCTTGTCAACCCGTGGAACGTTACAGAAGTTGCTGCTGCAATTGCCAGGGCTCTGAAGATGCCATCTGCAGAAAGAGAAAAGAGGCATAAGCATAATTTTCTTCATGTAACATCTCACACTGCTCAAGAATGGGCAGGAACCTTCGTAAGTGAACTAAATGATACTGTTATTGAGGCACAACTAAGGACAAGACAAGTTCCACCTCAGCTTCCAACCAAGGCTGCAATTGAAAGTTATCAGCAATCAACGAATCGATTGCTCATTTTGGTTTATGCAAGGCATACTAAGAAGTGTCCAGAGGATAAGAAAACTGCTGGAACTCTTGAAATTGCAGTGAAATTGTATTGCACTCTGTTTTCATTTGGGTGGATTTTAGCTCCTTTCAGAAGCTTGTGTACCACAAAAGTTAAGGATTATGATTGGGAAGCCGTAGGTGGTGAAAGGCCAATTCTTAATGGCACCACTTGTGTTGTTGAATTACAATTAGAAACGTGGATGGATGAGATCCAGAGGCAAAAGGGACAAAGAAAGTCCAAGAGGGAGACTCAGAAATTTTATGGGAGAAGTTGGAACGTAGAGCTAGGTCTAACCAGTATTTGTCCTGGAAGAAAGTTCCAAATCATAAAAGGTGAAGCTCATACTAATGGTAATGCAAGAACACCTCTTCCTGAAATGCCCCCATTTTCTGTCAAATTTTGGAATTGGGTCAGCAGCTCTATTCGGTATAATATAGACAGATCATCCTTGCAAAGTTTTGGTGTCTGGCAAGGATCCCTAATATTAGACCACTCTTATTGGTTGCTCCTTCTGTTGGATGGATCAAATGCAATACTGATGGGGCTGTCTGGGACTCTCCGGGTGCTGTTGCTTGTGGTGGGATTCAGTGGAACTTTAACTGAACCAGTCGAGAAAACAGGTGATCAGATTAAAGAAATGGAACTTAAGGTGCATCCAAAACTGAGACAACCTTTGACAGCACTATGCAGTGATCCAAATACCACAGTAGTTGTGCTCAGCGGAAGTGGTAGACAAGTCCTAAATGATGTAATGCTTGGCAAAATGCTTCTTTTCGGATAG 1473 0.4223 MLLLGLLSGVIVSVYLTFFFFTLFFLYTFLLILSLIIQFKWMLQGLKMQCRPIMELEFQRNKEGFAFLKWGSTAFPNMLVVPPGSGIVHQVNLEYLEGLYSTMRAYSILTVWRCHVGELFAGAAQSLGAGAILVNPWNVTEVAAAIARALKMPSAEREKRHKHNFLHVTSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPQLPTKAAIESYQQSTNRLLILVYARHTKKCPEDKKTAGTLEIAVKLYCTLFSFGWILAPFRSLCTTKVKDYDWEAVGGERPILNGTTCVVELQLETWMDEIQRQKGQRKSKRETQKFYGRSWNVELGLTSICPGRKFQIIKGEAHTNGNARTPLPEMPPFSVKFWNWVSSSIRYNIDRSSLQSFGVWQGSLILDHSYWLLLLLDGSNAILMGLSGTLRVLLLVVGFSGTLTEPVEKTGDQIKEMELKVHPKLRQPLTALCSDPNTTVVVLSGSGRQVLNDVMLGKMLLFG 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01885 490 Gene3D Glycogen Phosphorylase B; 120 170 - -
Phco9g01885 490 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 120 482 IPR001830 GO:0003824|GO:0005992
Phco9g01885 490 Pfam Aconitase family (aconitate hydratase) 53 98 IPR001030 -
Phco9g01885 490 Gene3D Glycogen Phosphorylase B; 171 182 - -
Phco9g01885 490 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 120 187 - -
Phco9g01885 490 Gene3D Aconitase, domain 3 37 111 IPR015931 -
Phco9g01885 490 Pfam Glycosyltransferase family 20 120 185 IPR001830 GO:0003824|GO:0005992
Phco9g01885 490 SUPERFAMILY Aconitase iron-sulfur domain 50 98 IPR036008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01885 Phco-Chr9 43470894 43477080 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g00816 10 10876543 10886805 Phco9g01885 9 43470894 43477080 ECH
Phco9g01885 9 43470894 43477080 Phco9g01885 9 43470894 43477080 ECH