Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01880 ATGCACCGTAGAATGCTCTCGAGGCCTCCTCTCGCTCATGCCACAAACGGTTCCTCGCAAGACAGTCTAAGAAAGTTCAGTAGCTTCTCCCCCACAGTGGCCTACATCTTACTCATTGTCTTCGTCATCTTCTTCTTCGTGGTGGGATTGGTGTTTTTCTACATCAAAAAGCACTCCTCGTCGAACTCCGAGGCCGGCGACATCCACGGGCCAGCGGTGTCAGATTCCGTGGCGTCGAGGTCTCTGACGATGGTGACTGTGGTGGCCGAGACGGCTGGAGAGTGCACTGTATGCCTGGAGAAGGTGGGAGAGGGAGAGGAGGTGCAGATGATTGCCCACTGCAAACACATATTCCACCAGAACTGCATTGACCGGTGGCTGGAGAACCAGGTGACGTGCCCCGTGTGTCGGTACTCTGAGAGGAGTGGAGAGGAGGAGCTTGTGACAGTGGGAGGAGGAGAAGAAGAAGATGCAGAAGTTTCTGTAACAAACTTGGAAATCCGATCCAAGTCCAAACACGCAATCACCGGGTTCTCTCTCCGTCTCCCTTCGTTCCTAACCCTATCATTTTCTGCCGGACCCTCCGATCGGACTCTAAAATCACAACCATCACCACCACCCTCTCTCTCTCTATATAAGTAA 642 0.5312 MHRRMLSRPPLAHATNGSSQDSLRKFSSFSPTVAYILLIVFVIFFFVVGLVFFYIKKHSSSNSEAGDIHGPAVSDSVASRSLTMVTVVAETAGECTVCLEKVGEGEEVQMIAHCKHIFHQNCIDRWLENQVTCPVCRYSERSGEEELVTVGGGEEEDAEVSVTNLEIRSKSKHAITGFSLRLPSFLTLSFSAGPSDRTLKSQPSPPPSLSLYK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01880 213 Pfam Ring finger domain 94 137 IPR001841 -
Phco9g01880 213 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 18 152 - -
Phco9g01880 213 SMART ring_2 95 136 IPR001841 -
Phco9g01880 213 MobiDBLite consensus disorder prediction 192 213 - -
Phco9g01880 213 MobiDBLite consensus disorder prediction 1 22 - -
Phco9g01880 213 SUPERFAMILY RING/U-box 94 139 - -
Phco9g01880 213 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 142 IPR013083 -
Phco9g01880 213 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01880 Phco-Chr9 43412007 43413232 Dispersed/Transposed