Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01860 ATGGCTTCCCTCAAACAACTTTCCACCCTGTTACTCCCTCTGTTGCTCATTTCCCTCTTCAAACCCTCCAACGCCGGAGGAATCGCCGTCTACTGGGGTCAAAACGGCAACGAGGGCACCTTGGCCGACGCATGCAACACCGATAACTACCAATTCGTCAACATAGCATTCTTGTCCACGTTCGGCGGCGGCCAGACCCCACAACTGAACCTCGCTGGCCACTGCGACCCCTCCACCAACGGCTGCACCCAGTTCAGCGACCAGATCAAGGCGTGCCAGAGCAAAGGCATCAAAGTGCTGCTCTCACTAGGCGGCGCCAGCGGCAGCTACTCCCTCAGCTCCGCCGATGATGCAACACAAGTTGCCACCTTCATCTGGAACAACTTCCTCGGTGGGCAGTCGAGCTCCCGTCCGCTGGGCGACGCCGTCCTGGACGGTGTCGATTTCGACATCGAAGCAGGCAACGGCGAACACTGGGACGAGCTGGCGAGAGCCCTAAAAGGGTTTAGTTCGGGATTGCTCTTAGCTGCTGCACCACAATGTCCGATCCCTGATGCTCACTTGGATTCTGCCATCAAAACCGGGCTCTTTGACTATGTGTGGGTGCAATTCTACAACAACCCTCCTTGTCAGTATTCCAGTGGCAACACCAACAGCCTCATCAGTTCCTGGAACCAGTGGACCTCAAGCCAGGCCAAGCAATTGTTTTTGGGAGTGCCAGCTTCTACAGCAGCTGCTGGAAGTGGGTTTGTTCCTTCTGATGTGTTAACCTCCCAGGTTCTTCCTGCCATCAAGAGTTCTTCCAAGTATGGTGGAGTCATGCTGTGGGACAGATACAATGATGGTCAAAGTAAATACAGTGATGCTATCAAAGGAAGTGTTTAG 885 0.5435 MASLKQLSTLLLPLLLISLFKPSNAGGIAVYWGQNGNEGTLADACNTDNYQFVNIAFLSTFGGGQTPQLNLAGHCDPSTNGCTQFSDQIKACQSKGIKVLLSLGGASGSYSLSSADDATQVATFIWNNFLGGQSSSRPLGDAVLDGVDFDIEAGNGEHWDELARALKGFSSGLLLAAAPQCPIPDAHLDSAIKTGLFDYVWVQFYNNPPCQYSSGNTNSLISSWNQWTSSQAKQLFLGVPASTAAAGSGFVPSDVLTSQVLPAIKSSSKYGGVMLWDRYNDGQSKYSDAIKGSV 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01860 294 Gene3D Glycosidases 26 294 - -
Phco9g01860 294 Pfam Glycosyl hydrolases family 18 28 281 IPR001223 GO:0005975
Phco9g01860 294 FunFam Acidic endochitinase SE2 26 294 - -
Phco9g01860 294 CDD GH18_hevamine_XipI_class_III 26 292 IPR045321 -
Phco9g01860 294 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 144 152 IPR001579 GO:0004553|GO:0005975
Phco9g01860 294 SUPERFAMILY (Trans)glycosidases 22 289 IPR017853 -
Phco9g01860 294 PANTHER ENDOCHITINASE 11 291 - -
Phco9g01860 294 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 294 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01860 Phco-Chr9 43114798 43115682 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01860 9 43114798 43115682 Phco9g01860 9 43114798 43115682 ECH