Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01859 ATGGCCTCTCAAAGACTAGCTTCCATCATACTTCTCTTATCCCTTTTCACCATCTCTTCCTCACGCCCTGACAATGGCGGAATTGCTGTGTACTGGGGCCAAGACGGTCGAGAAGGTGATTTGGTAACCGCATGTAACAGTGGAAACTACAAGATTGTGCTCCTTGCTTTCCTCAACAAGTTCGGTGCAGGGAGAACCCCAGCTTGGAACTTCGCCGGTCACTGCGACAATGGTGCCTCGAAAAAGTGCACCGAACTAGAGTCCGAAATAAGACAGTGCCAGGAGAAAGGCATCAGAGTGCTCCTTTCAATCGGAGGAGCCCCTCACTATTCAGACTACTCGCTGAGCTCGCCGGAGAACGCAAAGGAGGTGGCCGACTACCTCTACGAAAGGTTCCTCAGTGGCCAATTTGGTCCACTGGGAAACGTGATGTTGGACGGAATCGACTTCGACATTGAAAAGACGGAGGATTACTGGGACGACCTTGCCAGGAAACTCGACTTCTTCCGACGAACGACGGGGCGTTACTTTTACTTGTCCGCAGCCCCTCAGTGCCCAACAAACCCAATCTACTATCTCGGCAAAGCCATCGCCACCAAACTCTTCGACTACATCTTCGTTCAGTTCTACAACAACCCTAGTTGCTCCTACACCACTGGCACCAACGCCGTCTTGAACTCCTGGGACCAGTGGGTCGACTTGGTCCCCTCAAACAACTCGCTCTTCGTGGGCCTGCCAGCAGCGTCCAGCGCCGGCAACGGTTACATTCCGGCGGAGGTCCTGAACGACCAGGTGCTTCCGCACGCGAAGCAAGCCTCGAATTACGAGGGAGTGATGCTGTGGGATAGATACCGCGATGTTCAGAATGGTTACAGTAATAGCATACTGTCAAATGTGCTTAAGTCGAAGTTGCCGGTGTCTGTAGAGTCAGTTTCCGACGGAATTTACCCCTCCGTCTATAAGGCGTAG 969 0.5273 MASQRLASIILLLSLFTISSSRPDNGGIAVYWGQDGREGDLVTACNSGNYKIVLLAFLNKFGAGRTPAWNFAGHCDNGASKKCTELESEIRQCQEKGIRVLLSIGGAPHYSDYSLSSPENAKEVADYLYERFLSGQFGPLGNVMLDGIDFDIEKTEDYWDDLARKLDFFRRTTGRYFYLSAAPQCPTNPIYYLGKAIATKLFDYIFVQFYNNPSCSYTTGTNAVLNSWDQWVDLVPSNNSLFVGLPAASSAGNGYIPAEVLNDQVLPHAKQASNYEGVMLWDRYRDVQNGYSNSILSNVLKSKLPVSVESVSDGIYPSVYKA 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01859 322 CDD GH18_hevamine_XipI_class_III 26 295 IPR045321 -
Phco9g01859 322 FunFam Acidic endochitinase SE2 26 299 - -
Phco9g01859 322 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 145 153 IPR001579 GO:0004553|GO:0005975
Phco9g01859 322 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 26 307 IPR001223 GO:0005975
Phco9g01859 322 SUPERFAMILY (Trans)glycosidases 24 295 IPR017853 -
Phco9g01859 322 Gene3D Glycosidases 24 313 - -
Phco9g01859 322 PANTHER ENDOCHITINASE 9 296 - -
Phco9g01859 322 Pfam Glycosyl hydrolases family 18 28 283 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01859 Phco-Chr9 43093030 43094190 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01859 9 43093030 43094190 Phco6g02398 6 45371762 45372664 ECH
Phco9g01859 9 43093030 43094190 Phco9g01859 9 43093030 43094190 ECH