Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01849 ATGCGTGTTATCCTTGCTTCAAACCGTGGAACTGTTATGGAGCTAGGAATAACCCCCATTGTGACATCTGGGCTGGTAATGCAACTCTTGGCTGGGTCAAAGATAATTGAAGTGGACAACAATGTGCGGGAGGATCGAGCTCTCTTAAATGGTGCGCAGAAGCTACTTGGCATCTTGATAGCTATTGGTGAGGCAGTTGCATATGTTCTTTCTGGGATGTATGGTAGTGTGGGCCAACTTGGAGTGGGAAATGCAATCCTCATTATCCTCCAGCTCTGTTTTGCGGGTATTATTGTGATATGTTTAGATGAGCTCCTTCAGAAAGGGTATGGTTTGGGATCTGGAATTTCTCTATTCATTGCTACTAATATATGTGAAAACATCATATGGAAAGCATTCAGTCCCACCACCATTAATAGTGGACGGGGAGCCGAATTTGAGGGTGCTGTCATAGCACTATTCCATTTGTTGATAACTAGATCGGACAAGGTTCGAGCCCTTCGTGAAGCATTTTACCGGCAAAACCTTCCCAATGTGACAAATCTGCTTGCTACTGTCTTGATCTTCCTAATTGTGATATACTTCCAAGGTTTCCGTGTGGTTTTGCCTGTGAGATCAAAGAATGCCCGTGGGCAGCAGGGTTCATATCCAATCAAGCTATTTTATACCTCCAATATGCCAATTATTCTTCAGTCTGCCCTTGTGTCCAATCTCTACTTCATTTCTCAGCTTCTACACAGAAAGTACAGTGGAAACTTCTTTGTTGATCTATTGGGCAAATGGAAGGAGTCTGAATATGGAGGTCAATCTGCTCCTGTTGGTGGTATTGCATACTACATCACTGCTCCTTCCAGCTTAGCTGACATGGCAGCAAATCCTTTCCATGCATTGTTCTACCTTGTGTTTATGTTGTCAGCATGTGCCTTGTTCTCTAAAACTTGGATTGAAGTCTCTGGTTCATCTGCTAGAGATGTTGCAAAGCAGCTGAAGGAGCAACAAATGGTAATGCCTGGACATCGGGAGTCAAACCTGCAGAAAGAATTGAACCGATACATTCCCACTGCTGCAGCATTTGGAGGCATTTGTATTGGTGCTCTGACTGTGTTGGCAGATTTCATGGGGGCAATCGGTTCAGGGACTGGAATATTGCTTGCAGTAACAATCATATATCAGTACTTCGAGACATTTGAGAAGGAGAGAGCTAGTGAGCTTGGCTTCTTTGGTTTCTGA 1230 0.439 MRVILASNRGTVMELGITPIVTSGLVMQLLAGSKIIEVDNNVREDRALLNGAQKLLGILIAIGEAVAYVLSGMYGSVGQLGVGNAILIILQLCFAGIIVICLDELLQKGYGLGSGISLFIATNICENIIWKAFSPTTINSGRGAEFEGAVIALFHLLITRSDKVRALREAFYRQNLPNVTNLLATVLIFLIVIYFQGFRVVLPVRSKNARGQQGSYPIKLFYTSNMPIILQSALVSNLYFISQLLHRKYSGNFFVDLLGKWKESEYGGQSAPVGGIAYYITAPSSLADMAANPFHALFYLVFMLSACALFSKTWIEVSGSSARDVAKQLKEQQMVMPGHRESNLQKELNRYIPTAAAFGGICIGALTVLADFMGAIGSGTGILLAVTIIYQYFETFEKERASELGFFGF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01849 409 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 1 403 IPR002208 GO:0015031|GO:0016020
Phco9g01849 409 SUPERFAMILY Preprotein translocase SecY subunit 2 399 IPR023201 -
Phco9g01849 409 PIRSF SecY_Sec61alpha 2 404 IPR002208 GO:0015031|GO:0016020
Phco9g01849 409 ProSitePatterns Protein secY signature 1. 11 30 IPR030659 -
Phco9g01849 409 Gene3D SecY subunit domain 1 408 IPR023201 -
Phco9g01849 409 Pfam SecY 11 392 IPR002208 GO:0015031|GO:0016020
Phco9g01849 409 FunFam Transport Sec61 subunit alpha isoform 2 1 407 - -
Phco9g01849 409 PRINTS Preprotein translocase SecY subunit signature 109 132 - -
Phco9g01849 409 PRINTS Preprotein translocase SecY subunit signature 10 30 - -
Phco9g01849 409 NCBIfam preprotein translocase subunit SecY 1 400 IPR002208 GO:0015031|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01849 Phco-Chr9 42954418 42956893 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01849 9 42954418 42956893 Phco9g01849 9 42954418 42956893 ECH