Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01848 ATGGAAGTTGATGCAGCAATGATGATGTGTGTTGGATTTTTGATTGCATTTGTTATGATGTTCTTAAGAAAAGCAGTGAGTTGGGTGTGGTTGGAACCGAAAAGGGCAGAGAGATTCCTGAGAAGACAAGGGCTAAAGGGTAACCCATACACACTTTTCTTTGGAGACATAAAAGCAATGAGCATGATGCTGCATCAAGCAAAATCTAAACCCATACTCATCAACGATGATGTTGCTCCTCGCCTTGCTCCATTTCAAAATCAATTGGTCAAAGTTTGTGGTAAGAATTCGTTTTTCTGGTATGGCCCTAAGATTACAGTGAATATTATGGATCCTGAAGCAATAAAAGAGGTTCTGAACATGATGAATGACTTTCCAAAGCCAAGACTTAATCCACTGGCCAAGTTCCTGATAACAGGACTTGTAGATCTTGAGGGAGACAAATGGTCAAAGCACAGAAAGATCATCAACCCTGCATTTAATATCGTCAAACTCAAGCTAGTGTTGCCTGCCATGTATCATAGTTGTAATCAGATGATGAAGGAATGGAAGATGGTACTAAGAGAAACAGGATCATGCATGGTAGATGTTTGGCCATTCTTAAACAACTTGACAGCAGATGTGATTTCTCGAACAGCTTTCGGAAGTAGCTATGAAGAAGGAAAAATAGTGTTTCAACTCCTAAAAGAACAAGCAGAACTTACAGCCAAGGTCTTTCAATCTGTTTATATTCCAGGGTGGAGGTTTCTACCAACTAGATTGAACAAGAGAATGAAGAAGATTGACTACGAAATTGGAAATGTACTTAGTGGAATTATCCAAAAGCAGGAGGGTATCATGAAGACATGCGAAGCTCCAAATGATAACCTATTAGGGTTACTATTGGAATCCAATCAAAAAGAGATTGAAGATGGAGGAGTTAAGAAAGACGTTGGAATGAACACCAATGATGTAATTAACGAGTGTAAGTTATTTTACTTTGCTGGACAAGAAACAACATCGGTGCTACTCAATTGGACAATGGTGTTATTGAGTAGGTTTCCCCATTGGCAAACACTAGCAAGAGAAGAGGTCATTGAAATTTTTGGCACAAAAGAACCAGATTATGATGGATTAAATCGTCTAAAAGTTGTCACAATGATTTTGTATGAGGTTCTAAGATTATACCCACCAGTTACTGCTATTACCAGAGTCCTGAGGAAGAAAACTAGGGTTGGAAATATGACTTTACCAGAGGGAGCACTAGTTACTATTCCAATTGTGTTGGTACATCATGATTTTGAACTATGGGGCAGTGATGCAAAAGAGTTCAAACCAGAAAGATTCTCTGAAGGAATCTTAAAAGCAACAAATGGTCAAGTTTCATTTATCCCATTTGGATGGGGTCCTAGAATATGCATTGGCCAAAACTTTGCTTTGCTTGAAGCCAAAATGGCTTTGTCTCTGATCCTGCAAAACTTCAAGTTTGAGCTATCTTCGTCATATGTTCATGCTCCAGTTACAGTCATAACTGCTCAACCCCAATTCGGCACTCATATTATATTACAAAAGTTATAG 1557 0.386 MEVDAAMMMCVGFLIAFVMMFLRKAVSWVWLEPKRAERFLRRQGLKGNPYTLFFGDIKAMSMMLHQAKSKPILINDDVAPRLAPFQNQLVKVCGKNSFFWYGPKITVNIMDPEAIKEVLNMMNDFPKPRLNPLAKFLITGLVDLEGDKWSKHRKIINPAFNIVKLKLVLPAMYHSCNQMMKEWKMVLRETGSCMVDVWPFLNNLTADVISRTAFGSSYEEGKIVFQLLKEQAELTAKVFQSVYIPGWRFLPTRLNKRMKKIDYEIGNVLSGIIQKQEGIMKTCEAPNDNLLGLLLESNQKEIEDGGVKKDVGMNTNDVINECKLFYFAGQETTSVLLNWTMVLLSRFPHWQTLAREEVIEIFGTKEPDYDGLNRLKVVTMILYEVLRLYPPVTAITRVLRKKTRVGNMTLPEGALVTIPIVLVHHDFELWGSDAKEFKPERFSEGILKATNGQVSFIPFGWGPRICIGQNFALLEAKMALSLILQNFKFELSSSYVHAPVTVITAQPQFGTHIILQKL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01848 518 CDD CYP72 84 514 - -
Phco9g01848 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Phco9g01848 518 Pfam Cytochrome P450 87 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 22 510 - -
Phco9g01848 518 FunFam Cytochrome P450 734A1 30 518 - -
Phco9g01848 518 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 SUPERFAMILY Cytochrome P450 81 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01848 518 Gene3D Cytochrome P450 29 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01848 Phco-Chr9 42932330 42940766 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01848 9 42932330 42940766 Phco9g01848 9 42932330 42940766 ECH