Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01808 ATGCAGCTATCGTCATCTTCTTCCTCAACAGCAATACTGTGTGTGCTGACTGTCATCATAGCGGTGCTTCCCGTCTGGGCAGTGAAGACGCTGAACTCGCTGTGGCTTAGGCCTAAGAGGTTCGAGAAGCTTCTAAGAGCACAAGGTCTTCATGGTGACCCATACTCCCTTTCACGCCCCTCCTCCAACCAAAACCAGCCTCCACAAGACACGCCTCATTCTCAATCTTTTGTTCTCTCCGATGATGTTGCTCCTCGCGTCTTCTTGCCGGCTTACAACACTGTTGCCAAATACGGCAAGAATTCGTTCTTATGGGAAGGCACAACACCAAAGGTCATCGTTACTGATCCAAATCACATCAAAGAAGTCTTCAATCACATTCATGATTTCCAGAAACCGAAGATAAGTAGCACTGGCAAGTTCTTCTTCTGTGGTCTGATAAGTCACGAGGGTGATAAGTGGGCTCAACATCGAAAGATTATAAACCCTGCTTTCCACTTAGAAAGATTGAAAAATATGCTACCAGCATTCTCCCAAAGCTGCCATGATGTGATTAGCAAGTGGATGGGAATGTTGTCATCAGATGGAAAATGTGAGATTGACGTTTGGCCTTTCCTTCGAAAATTGACTTGTGATGTAATTTCCAGAACAGCTTTTGGAAGCAGCTATGCAGAAGGAGAAAAAATATTTCAACTTCTTGGAATTCAGGGGCGCCTTATCATGACTCAAAAGTACACGAACAAACCAATATTGCGGCATATACCAACACCTGCCAAAATGAAGATGAGAGCACTTGATAAGGAAATGAAAAATTCAATTCGGGTTATCATAGAAAAACGAGAGAAAGCCATGAAGAATGGTGAATCCAGCAATGAAGATTTATTAGGCGTACTTTTGGAATCAAATCAAATGGAAATCCAGGGAAATGGAAACAATAAGAGTGTTGGAATGACGATTGAAGAAGTAATTAGTGAATGCAAATTATTCTACGTAGCAGGGCAAGAGACCACTTCATCTCTGCTGGTTTGGACATTGATCATGTTGAGTAAATATCCTGAATGGCAAGCACGAGCAAGAGAGGAAGTTCTTCATGTTTTTGGAAAACAAAATCCAAACTTTGATGGGTTAAGTCTGCTTAAAACTATGACCATGATTCTGTACGAGGTTCTGAGGTTATACCCTCCCAACATTTTCTTCAATCGCACTCTTAAGAAGGACATGGAACTTGGAAACCTGTTACTACCCGCAGGAGTAGATGTTACCATGCCAATACTTTTACTTCATCAGGATGGTTATATCTGGGGTAATGATGCAAAGGAGTTCAAACCAGAAAGATTTTCTGAGGGAGTTGCTAAGGCAACAAAAGGCCAAGTCTCGTTTTACCCATTTGGATGGGGTCCTAGAATTTGCATTGGCCAAAACTTTACCATGTTGGAAGCCAAGATAGTGTTGTCATTGCTTCTGCAGAATTTCTCCTTCGAGCTTTCTCCTGTCTATGTACATGCTCCTGCACTTATGTTTACTTTGCAGCCCAAACAGGGGGCGCCCCTTATTGTGCAAAAGCTATGA 1569 0.4245 MQLSSSSSSTAILCVLTVIIAVLPVWAVKTLNSLWLRPKRFEKLLRAQGLHGDPYSLSRPSSNQNQPPQDTPHSQSFVLSDDVAPRVFLPAYNTVAKYGKNSFLWEGTTPKVIVTDPNHIKEVFNHIHDFQKPKISSTGKFFFCGLISHEGDKWAQHRKIINPAFHLERLKNMLPAFSQSCHDVISKWMGMLSSDGKCEIDVWPFLRKLTCDVISRTAFGSSYAEGEKIFQLLGIQGRLIMTQKYTNKPILRHIPTPAKMKMRALDKEMKNSIRVIIEKREKAMKNGESSNEDLLGVLLESNQMEIQGNGNNKSVGMTIEEVISECKLFYVAGQETTSSLLVWTLIMLSKYPEWQARAREEVLHVFGKQNPNFDGLSLLKTMTMILYEVLRLYPPNIFFNRTLKKDMELGNLLLPAGVDVTMPILLLHQDGYIWGNDAKEFKPERFSEGVAKATKGQVSFYPFGWGPRICIGQNFTMLEAKIVLSLLLQNFSFELSPVYVHAPALMFTLQPKQGAPLIVQKL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01808 522 Gene3D Cytochrome P450 92 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 SUPERFAMILY Cytochrome P450 88 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 MobiDBLite consensus disorder prediction 55 76 - -
Phco9g01808 522 CDD CYP72 93 518 - -
Phco9g01808 522 Pfam Cytochrome P450 96 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 PANTHER CYTOCHROME P450 FAMILY MEMBER 26 514 - -
Phco9g01808 522 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 PRINTS P450 superfamily signature 332 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 PRINTS P450 superfamily signature 461 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 PRINTS P450 superfamily signature 470 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 463 472 IPR017972 GO:0005506|GO:0016705
Phco9g01808 522 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 PRINTS E-class P450 group I signature 460 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 PRINTS E-class P450 group I signature 341 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 PRINTS E-class P450 group I signature 321 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 PRINTS E-class P450 group I signature 470 493 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01808 522 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01808 Phco-Chr9 42165841 42168050 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01808 9 42165841 42168050 Phco9g01808 9 42165841 42168050 ECH
Phco9g01808 9 42165841 42168050 Phco10g00645 10 7429848 7430631 PCT