Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01801 ATGGAGCTATCGTTATCTTGTTCCTCAACCGCAATACTATGTGTGGTGACTGTCATCATAGCTGTAGTTCCCGTATGGGCAGTGAAGATGCTGAACTCGCTGTGGCTTAGGCCTAAGAGGTTCGAGAAGCTTCTAAGAGCACAAGGTCTTCATGGTGACCCATACTCCCTTTCACGCCCCTCCTCCAACCAAAACCAGCCTCCACAAGACACGCCTCATTCTCAATCTTTTGTTCTCTCCGATGATGTTGCTCCGCGCCTCTTCTTGCCGGCTTACAACACTGTTGCCAAATACGGCAAGAATTCGTTCTTATGGGACGGCACAACACCAACAGTCATCATTACTGATCCAAATCACATCAAAGAAGTCTTCAATAACATTCATGATTTCCAGAAACCAAAGATGAGTAGCATTGCCAAGTTCGTGATCGGTGGTTTGGTAACTTACGAGGGTGATAAGTGGGCTCAACATCGAAAGATCATCAACCCTGCATTCAACTTAGGAAAATTGAAAGATATGCTACCAGAATTCACCCAAAGCTGCCATGATATGATTAGCAAGTGGATGAGAATGTTGTCATCAGATGGAAAATGTGAGATTGACGTTTGGCCTTTCCTTCAGAATTTGACTCGTGATGTAATTTCTAGAACAGCTTTTGGAAGCAGCTATGCAGAAGGAGAAAAAATATTTCAACTTCTGAGACTTCAGGGGTACCTTGTTGCGACTGCAAAGTGGAACAAACCAATATTGCGGCATATACCAACACCTGCCAGAATGAAGATGAGAGCAGTTGATAAGGAAATGAAAAATTCAATTCGGGTTATCATAGAGAAACGAGAGAAAGCCATGAAGAATGGTGAATCCAGCAATGAAGATTTATTAGGCATACTTTTGGAATCAAATCAAATGGAAATCCAGGGAAATGGAAACAGTAAGAGTGTTGGAATGACAATTGAAGAAGTAATTAGTGAATGCAGATTATTCTACTTAGCAGGGCAAGAGACCACTTCATCTCTGCTGGTTTGGACATTAATCATGTTGAGTAAATATCCTGAATGGCAAGCACGAGCAAGAGAGGAAGTTCTTCATGTTTTTGGAAAACAAAATCCAAACTTTGATGGGTTAAGTCTGCTTAAAACTATGACCATGATTCTGGACGAGGTTCTGAGGTTATACCCTCCTAACGTTTACTTCAATCGCACTGTTCAGAAGGACATGGAACTTGGAAACCTATTACTACCCGCAGGAGTAAATGTTATCATGCCAATACTTTTACATCACCAAGATGGTGATATATGGGGTAATGATGCAAAGGAGTTCAAACCAGAAAGGTTCTCTGAAGGAGTTGCTAAGGCAACAAAAGGCCAAGTCTCGTTTTACCCATTTGGATGGGGTCCAAGAATTTGCATTGGCCAAAACTTTACCATGTTGGAAGCCAAGATAGTGTTGTCATTGCTTCTGCAGAATTTCTCCTTCGAGCTTTCTCCTGTCTATGTACATGCTCCTGCAGTTATGCTTACTTTGCATCCCAAACAGGGGGCGTCCCTTATTGTGCAAAAGCTATGA 1566 0.4215 MELSLSCSSTAILCVVTVIIAVVPVWAVKMLNSLWLRPKRFEKLLRAQGLHGDPYSLSRPSSNQNQPPQDTPHSQSFVLSDDVAPRLFLPAYNTVAKYGKNSFLWDGTTPTVIITDPNHIKEVFNNIHDFQKPKMSSIAKFVIGGLVTYEGDKWAQHRKIINPAFNLGKLKDMLPEFTQSCHDMISKWMRMLSSDGKCEIDVWPFLQNLTRDVISRTAFGSSYAEGEKIFQLLRLQGYLVATAKWNKPILRHIPTPARMKMRAVDKEMKNSIRVIIEKREKAMKNGESSNEDLLGILLESNQMEIQGNGNSKSVGMTIEEVISECRLFYLAGQETTSSLLVWTLIMLSKYPEWQARAREEVLHVFGKQNPNFDGLSLLKTMTMILDEVLRLYPPNVYFNRTVQKDMELGNLLLPAGVNVIMPILLHHQDGDIWGNDAKEFKPERFSEGVAKATKGQVSFYPFGWGPRICIGQNFTMLEAKIVLSLLLQNFSFELSPVYVHAPAVMLTLHPKQGASLIVQKL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01801 521 CDD CYP72 93 517 - -
Phco9g01801 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 PRINTS E-class P450 group I signature 209 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 PRINTS E-class P450 group I signature 95 114 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 Gene3D Cytochrome P450 73 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 Pfam Cytochrome P450 96 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 SUPERFAMILY Cytochrome P450 86 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Phco9g01801 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Phco9g01801 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 513 - -
Phco9g01801 521 MobiDBLite consensus disorder prediction 56 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01801 Phco-Chr9 42118685 42121069 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01801 9 42118685 42121069 Phco9g01801 9 42118685 42121069 ECH
Phco9g01801 9 42118685 42121069 Phco10g00655 10 7601449 7606168 PCT