Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01779 ATGTTTCTCCCCCGCACTTTCCAGTCCACTCCACACCAGCACGCCTCCGTCACCATCGCTACTATGTCGTCCTCCACCGTCGCCGGCTCTGACACTCCCCCCTCGTTCACAGCGACTCCCTCGAAAACCCCTTCGTCGAAGGCGAGCAGCCGGCGGAGCCAGGCGGAGTTGAAGTCCCGGTTCGAGGCGTACAATCGGCTGCAGGCCGCGGCAGTGGCGTTCAGCGAGACGATGTCGATCCCGGAGATCGTGGCGGTCGGGGGCCAGTCAGACGGGAAGAGTTCGCTCCTAGAGGCGCTCCTCGGGTTCCGGTTCAACGTGCGCGAGGTCGAGATGGGCACTCGCAGACCCCTCATACTCCAGATGGTTCACGACGCCTCCGCTCTCGAACCCCGATGTCGCTTTCAGGAGGAGGATTCGGAAGAGTATGGAAGTCCCTTAGTTTTGGCATCTGCGATTGCTGACATTATAAAGTCCAGAACTGAGGCACTTTTGAAGAAAACCAAGGCAGCAGTTTCTCCCAAGCCAATTGTAATGAGAGCCGAGTATGCACATTGTCCTAACCTTACTATTATTGACACACCTGGGTTTGTTCTTAAGGCAAAGAAGGGTGAGCCAGAGAACACACCCGATGAAATCCTTTCCATGGTGAAGTCCTTGGCTAGTCCTCCTCATCGCATACTCTTGTTCCTTCAGCAAAGTAGTGTTGAGTGGTGCTCCTCGTTGTGGTTGGATGCCATTCGCGAAATTGACCCAACATATAGGCGGACAGTGATTGTTGTCTCCAAATTTGATAACCGTCTAAAGGAATTTGGTGACCGTTGGGAAGTGGATCGCTATTTGAGTGCGAGTGGTTACCTTGGAGATAGCACTCACCCCTTTTTTGTGGCACTTCCAAAGGATAGGGGTAATGTTTCAAATGATGAGTTCAGGAGGCAGATTTCTCAGGTGGACTCAGAGGTTCTTCGCCATTTGCGTGAGGGTGTCAAGGGAGGTTTTGATGAAGAAAAATTCAAATCCTATATTGGCTTTGGTCGTCTGAGAGATTATTTGGAGTCGGAGCTTCAGAAGAAGTACAAAGAAGCCGCCCCAGCAACGCTTGCTTTGCTAGAGCAACGCTGCAGTGAAGTGACTTCTGAACTTGCTAGAAAGGATTCGAAAATACAGGCCACTTCAGATGTTTCCCATCTCAGGAAATTTGCAATGCTGCATGTGGCTTCTATCAGCAACCATGTGGGTGCATTGATTGATGGTGCTGCAGATCCTTCCCCTGAGCAGTGGGGGAAAACAACAGTTGAAGAGAGGTCACAAAGTGGTATTGGGGTTTGGCCTGGTGTCATTGCCTGTGTAAACCCCCCCAATGCTACTCTTCGTCTTTATGGAGGAGCTGCATTTGAGAGGGTGATGCATGAATTTCGCTGTGCCGCATATTCCATAGAATGCCCATCAGTGTCGAGGGAGAAGGTTGCAAATATATTACTCGCTCACGCTGGTCGAGGTGGGGGAAGAGGAAGAACAGAGGCTGCTGCAGAGATTGCTCGAGCCGCTGCTAAATCATGGCTTGCTCCTCTTCTTGACACTGCTTGTGACCGACTTGCTTTTGTCTTGGGAAGTTTATTTGATTTGGCTTTAGAAAGAAACCGTATTCGAGATTTAGAATGTGGGATTACAGGGGGAAACATGGATGGCTATGTAGGTTTCCATGCTGCTTTAAGATGTGCTTACAATCGCTTCATAGGGAATCTTGCCAAGCATTGCAAGCAGCTTGTAAGGCACCACCTTGATTCAGCTACTAGTCCATACTCACAGGTCTGCTACTTCAATGACTATGAACCCTCTTGTAACAAATTCAGCCAGGCTTCAGCCTCTTCGTTTTTCCTTGAGCTAAGTGATACTAGTTCAGCTTCCCATGATGCAAGGAGGGATCAGGAAAATATACCTCCAGAAAACAATGCACAAGAAACCACACCAGGTAAAGCAGCAGAAACTAGAGATGCCTTGAGAGAAAGTCACATAACTATCCCTGAGACCCCATCTCCTGATCAACCAGGTGATGCGGCATATGGGGTGGTTAAAAAGGAGCTTGGAATTTGCAATGACGTGGGACCAAGAAAGAGAGCGTCCAGAATGGGAGGGAATTGCAAAAATTCTGACTATGTGACGCTGCAAAATGGTGGCGTTTTATTTGGAAATGGCGAGAGATCAGGTTCAGCTTACTCGGATATCTGTATATCAGCTGCCCAGCATTTTGCACGTATTCGTGAAGTTCTTGTTGAGAGAGGCGTGACATCAACATTAAATTCGGGATTTCTAACCCCTTGCCGAGACCGGATATTCGAGGCTCTTGGGTTGGATTTATTTGCTGTGAACGATGAGAAATTCATGGACATGTTTGTAGCTCCTGGTGCCATAGATGTGCTAAAAAGTGAACGAGAGTCTCTCATGAAGCGTCAGAAGATACTCCAATCTTGCTTGAATGAATTCAAAAGTGTTGCTCAGGGACTATGA 2508 0.4876 MFLPRTFQSTPHQHASVTIATMSSSTVAGSDTPPSFTATPSKTPSSKASSRRSQAELKSRFEAYNRLQAAAVAFSETMSIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDASALEPRCRFQEEDSEEYGSPLVLASAIADIIKSRTEALLKKTKAAVSPKPIVMRAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKSLASPPHRILLFLQQSSVEWCSSLWLDAIREIDPTYRRTVIVVSKFDNRLKEFGDRWEVDRYLSASGYLGDSTHPFFVALPKDRGNVSNDEFRRQISQVDSEVLRHLREGVKGGFDEEKFKSYIGFGRLRDYLESELQKKYKEAAPATLALLEQRCSEVTSELARKDSKIQATSDVSHLRKFAMLHVASISNHVGALIDGAADPSPEQWGKTTVEERSQSGIGVWPGVIACVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPSVSREKVANILLAHAGRGGGRGRTEAAAEIARAAAKSWLAPLLDTACDRLAFVLGSLFDLALERNRIRDLECGITGGNMDGYVGFHAALRCAYNRFIGNLAKHCKQLVRHHLDSATSPYSQVCYFNDYEPSCNKFSQASASSFFLELSDTSSASHDARRDQENIPPENNAQETTPGKAAETRDALRESHITIPETPSPDQPGDAAYGVVKKELGICNDVGPRKRASRMGGNCKNSDYVTLQNGGVLFGNGERSGSAYSDICISAAQHFARIREVLVERGVTSTLNSGFLTPCRDRIFEALGLDLFAVNDEKFMDMFVAPGAIDVLKSERESLMKRQKILQSCLNEFKSVAQGL 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01779 835 PRINTS Dynamin signature 80 98 IPR022812 -
Phco9g01779 835 PRINTS Dynamin signature 183 200 IPR022812 -
Phco9g01779 835 PRINTS Dynamin signature 252 268 IPR022812 -
Phco9g01779 835 PRINTS Dynamin signature 105 122 IPR022812 -
Phco9g01779 835 SMART dynamin_3 57 293 IPR001401 GO:0003924|GO:0005525
Phco9g01779 835 CDD DLP_1 81 364 IPR001401 GO:0003924|GO:0005525
Phco9g01779 835 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 372 IPR027417 -
Phco9g01779 835 PANTHER DYNAMIN 62 829 IPR022812 -
Phco9g01779 835 FunFam Dynamin-related protein 5A 49 415 - -
Phco9g01779 835 Pfam Dynamin family 83 263 IPR045063 -
Phco9g01779 835 Gene3D - 47 416 IPR027417 -
Phco9g01779 835 MobiDBLite consensus disorder prediction 25 54 - -
Phco9g01779 835 MobiDBLite consensus disorder prediction 634 667 - -
Phco9g01779 835 MobiDBLite consensus disorder prediction 25 52 - -
Phco9g01779 835 ProSiteProfiles Dynamin-type guanine nucleotide-binding (G) domain profile. 77 364 IPR030381 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01779 Phco-Chr9 41785419 41791941 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01779 9 41785419 41791941 Phco9g01779 9 41785419 41791941 ECH