Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01778 ATGGGTGATATTAGTTTGAGGCAATGGTTAGATAAATCTCAACGAACAGTGAATTGCTTTGAATGCTTGAACATATTTAGGCAAATAGTAGAAATTGTTCATGTGGCTCATTCTCAAGGAAATGCTGTTCATAATGTGATGCCCTCTTGCTTTCTCATGTCATCTTTCAGCCATGCCTCTTTTATGGATTCAGCAACTTGTTCAGATGCTGACTTAGAAGATACTGAGATTAAAACTACAACACTTACCCCTACGCACCATCAGAGATGTTTAGGAAGTGATGATTTTGTGTCTGCCAAGACTTCAATAGCTTCTTTGTCAAACTCTAGTTGCTTGTTGTCAAGTGTGGTGTTTGTGGCACCTGCATCATTAATGAACCACACAGAAGGAAAGAAAATGAAAAACAAAATAAAGGATGAGGAAGGAAAGAAGCAAATTATTCATGTTAAAGAAGAACTTCGGATGGAGGCGAGTTGGTATACTAGTCCTGAAGAGGTTGCTGGTGCTCTAAGTTCCTGTGCTTCAGACATTTACCAGTTAGGAGTTCTCCTTTTTGAGCTATTTTGTCCACTGAGCTCAACAGAAGAAAAGAGCAGAACCATGTCCAGCCTTAGACATAGAGTTCTTCCTCCACAGTTACTTCTAAAGTGGCCTAAAGAAGCTTCATTTTGTTTATGGTTGTTACAACCTCAACCTAGTAATCGTCCAACAATAGAGGATTTGTTGCAGAGTGAATTTCTTAAGGAACCAAGACATGATATTGAAGAGTGTGCAACAGGAGAAAAACTTAGAGAAAGGATATATAATCAGGAGGTGTTGCTAGAATTCCTTTCCTTAATTCAGAAGAAAAAGGGAGAAGCTGCTGAGAAGTTGCAACATGCTATTTCATTTCTGTGTTCAGATATTGAAGAAGTGACTAAGCAGAAAACTGAGTTTATAGAGATAACTGGCACAAGATTAAGGAGTGATGATTGTTCAACATCAAGTTTCCCATCCACCATAGTTGTTGATAATGATGAGGATTGTACTAGTCCAAGGACCAGAAAACGAGTCAGAACTGACATGTGTGTTGATGACACTGCAGGATGGGATGATCAGAAAAAGGATGAAACTACTCTTTCTAAAAGTCCAAGGTTTTTGAAGAACTTCAAGAAACTAGAGTCAGCATATTTTTTGACACGATGCAAATCAGCCTATTCCTCTGGGAAACATGTGGTTGAACATACACCTATATCTACTAATGGTAGAGGGTCTTTTGTTGTCACTGAAAGGAGTTGTGTCAATAAAGCAGCATCAAAAGAACAATTAAGGGAAGGAAAAAGTCCTTGGACACATCCTTTCCTTGAGGGTTTGTGCAAGTACCTATCTATCAGTGAGTTAAAGGTTAAGGCTGACCTGAAACAAGGAGATCTTTTGAATTCTTCCAACCTAGTATGCTCACTCAGTTTTGATCGCGATGCAGAATTTTTTGCTACTGCAGGAGTAAATAAGAAGATTAAAGTATTTGAATATGACGCAACCATAAATGAGGATCGTGATATCCACTATCCAGTAGTGGAGATGGTTAGCCGATCAACATTGAGTAGTACATGCTGGAATACTTACATCAAAAGTCAAATTGCTTCAAGTAACTTTGAAGGTGTTGTTCAGCTCTGGGATGTCACAACAAGGCAAGTGCAGTCGGAGATGAGGGAGCATAAGCAAAGGGCATGGTCCATTGATTTCTCATCAACAGACCCCACATTACTAGCAAGTGCAAGTGATGACGGTTCTGTGAAGTTGTGGAATATCAATCAGGGAGTTAGTGTTGGTACCATCAAAACAAATGCAAATGTGTGTTGTGTTCAGTTTCCCCCTAATTTTTCTCATTTCCTTGCATTTGGTTCAGCAGATCATCAGATATATTACTATGATCTTCGCAACATAAAAATGCCTCTTTGTACATTAGTTGGACATAATAAGACAGTGAGCTACATCAAGTTTGTAGACACCATGAGCCTAGTCTCTGCATCCATAGATAACACTTTGAAGCTTTGGGATTTGTCCATGTGTGTTTCTGGGGTCATAGATTCACCGGTTCAATCATTCAATGGTCATATGAATATTAAGAACTTTGTGGGGTTGTCTGTATCAGACGGTTACATTGCTACTGGTTCAGAGACAAACGAGGTGTTCATATATCATAACGCTTTCCCCATGCCAGCATTGTCCTTCAAATTTTATAGCAGTGACCCTTTGTCTGTGGATGAAGCGGATGATTCTTCTAAGTTCATCACTTCTGTTTGTTGGCGTGGTCAGTCCCCAACCTTAGTTGCTGCAAACTCCACAGGGAATGTCAAAATTCTGGAGATGGCTTAA 2358 0.3944 MGDISLRQWLDKSQRTVNCFECLNIFRQIVEIVHVAHSQGNAVHNVMPSCFLMSSFSHASFMDSATCSDADLEDTEIKTTTLTPTHHQRCLGSDDFVSAKTSIASLSNSSCLLSSVVFVAPASLMNHTEGKKMKNKIKDEEGKKQIIHVKEELRMEASWYTSPEEVAGALSSCASDIYQLGVLLFELFCPLSSTEEKSRTMSSLRHRVLPPQLLLKWPKEASFCLWLLQPQPSNRPTIEDLLQSEFLKEPRHDIEECATGEKLRERIYNQEVLLEFLSLIQKKKGEAAEKLQHAISFLCSDIEEVTKQKTEFIEITGTRLRSDDCSTSSFPSTIVVDNDEDCTSPRTRKRVRTDMCVDDTAGWDDQKKDETTLSKSPRFLKNFKKLESAYFLTRCKSAYSSGKHVVEHTPISTNGRGSFVVTERSCVNKAASKEQLREGKSPWTHPFLEGLCKYLSISELKVKADLKQGDLLNSSNLVCSLSFDRDAEFFATAGVNKKIKVFEYDATINEDRDIHYPVVEMVSRSTLSSTCWNTYIKSQIASSNFEGVVQLWDVTTRQVQSEMREHKQRAWSIDFSSTDPTLLASASDDGSVKLWNINQGVSVGTIKTNANVCCVQFPPNFSHFLAFGSADHQIYYYDLRNIKMPLCTLVGHNKTVSYIKFVDTMSLVSASIDNTLKLWDLSMCVSGVIDSPVQSFNGHMNIKNFVGLSVSDGYIATGSETNEVFIYHNAFPMPALSFKFYSSDPLSVDEADDSSKFITSVCWRGQSPTLVAANSTGNVKILEMA 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01778 785 ProSiteProfiles Protein kinase domain profile. 1 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco9g01778 785 PANTHER PROTEIN SPA1-RELATED 2 3 784 IPR044630 GO:0009640
Phco9g01778 785 ProSitePatterns Trp-Asp (WD) repeats signature. 583 597 IPR019775 -
Phco9g01778 785 ProSiteProfiles Trp-Asp (WD) repeats profile. 563 605 IPR001680 GO:0005515
Phco9g01778 785 SUPERFAMILY Protein kinase-like (PK-like) 3 253 IPR011009 -
Phco9g01778 785 PRINTS G protein beta WD-40 repeat signature 540 554 IPR020472 -
Phco9g01778 785 PRINTS G protein beta WD-40 repeat signature 583 597 IPR020472 -
Phco9g01778 785 PRINTS G protein beta WD-40 repeat signature 667 681 IPR020472 -
Phco9g01778 785 Pfam WD domain, G-beta repeat 645 680 IPR001680 GO:0005515
Phco9g01778 785 Pfam WD domain, G-beta repeat 559 596 IPR001680 GO:0005515
Phco9g01778 785 ProSiteProfiles Trp-Asp (WD) repeats profile. 649 682 IPR001680 GO:0005515
Phco9g01778 785 Gene3D - 449 785 IPR015943 GO:0005515
Phco9g01778 785 SMART WD40_4 599 638 IPR001680 GO:0005515
Phco9g01778 785 SMART WD40_4 742 783 IPR001680 GO:0005515
Phco9g01778 785 SMART WD40_4 642 680 IPR001680 GO:0005515
Phco9g01778 785 SMART WD40_4 468 503 IPR001680 GO:0005515
Phco9g01778 785 SMART WD40_4 556 596 IPR001680 GO:0005515
Phco9g01778 785 SMART WD40_4 514 553 IPR001680 GO:0005515
Phco9g01778 785 SMART WD40_4 689 728 IPR001680 GO:0005515
Phco9g01778 785 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 649 682 - -
Phco9g01778 785 ProSitePatterns Trp-Asp (WD) repeats signature. 667 681 IPR019775 -
Phco9g01778 785 SUPERFAMILY WD40 repeat-like 472 783 IPR036322 GO:0005515
Phco9g01778 785 Gene3D Transferase(Phosphotransferase) domain 1 3 258 - -
Phco9g01778 785 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 563 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01778 Phco-Chr9 41757222 41765756 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK PEK_PEK Phco9g01778 WD40 0.0007 CL0186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01778 9 41757222 41765756 Phco9g01778 9 41757222 41765756 ECH